Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SgcaP82350 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SgcaP82350 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SgcaP82350 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SgcaP82350 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SgcaP82350 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SgcaP82350 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SgcaP82350 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SgcaP82350 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SgcaP82350 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
SgcaP82350 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SgcaP82350 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SgcaP82350 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SgcaP82350 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SgcaP82350 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SgcaP82350 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.85■□□□□ 0.29
SgcaP82350 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SgcaP82350 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SgcaP82350 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SgcaP82350 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SgcaP82350 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SgcaP82350 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SgcaP82350 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.84■□□□□ 0.29
SgcaP82350 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SgcaP82350 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SgcaP82350 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SgcaP82350 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SgcaP82350 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SgcaP82350 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SgcaP82350 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.84■□□□□ 0.29
SgcaP82350 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SgcaP82350 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SgcaP82350 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SgcaP82350 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SgcaP82350 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SgcaP82350 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SgcaP82350 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SgcaP82350 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SgcaP82350 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SgcaP82350 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SgcaP82350 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.83■□□□□ 0.28
SgcaP82350 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.83■□□□□ 0.28
SgcaP82350 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SgcaP82350 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SgcaP82350 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SgcaP82350 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SgcaP82350 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SgcaP82350 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SgcaP82350 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.82■□□□□ 0.28
SgcaP82350 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
SgcaP82350 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SgcaP82350 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.82■□□□□ 0.28
SgcaP82350 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SgcaP82350 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SgcaP82350 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SgcaP82350 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SgcaP82350 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
SgcaP82350 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.81■□□□□ 0.28
SgcaP82350 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SgcaP82350 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SgcaP82350 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SgcaP82350 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SgcaP82350 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SgcaP82350 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SgcaP82350 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SgcaP82350 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SgcaP82350 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SgcaP82350 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SgcaP82350 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.8■□□□□ 0.28
SgcaP82350 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SgcaP82350 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SgcaP82350 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SgcaP82350 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.8■□□□□ 0.28
SgcaP82350 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.8■□□□□ 0.28
SgcaP82350 Gm16437-201ENSMUST00000025669 507 ntBASIC16.8■□□□□ 0.28
SgcaP82350 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SgcaP82350 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SgcaP82350 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SgcaP82350 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SgcaP82350 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Scarna2-201ENSMUST00000157560 414 ntBASIC16.79■□□□□ 0.28
SgcaP82350 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SgcaP82350 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SgcaP82350 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms