Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pfn1P62962 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pfn1P62962 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pfn1P62962 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pfn1P62962 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.65■□□□□ 0.1
Pfn1P62962 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pfn1P62962 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pfn1P62962 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.64■□□□□ 0.1
Pfn1P62962 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pfn1P62962 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pfn1P62962 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
Pfn1P62962 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.64■□□□□ 0.09
Pfn1P62962 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.64■□□□□ 0.09
Pfn1P62962 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pfn1P62962 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pfn1P62962 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pfn1P62962 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pfn1P62962 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.64■□□□□ 0.09
Pfn1P62962 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pfn1P62962 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pfn1P62962 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pfn1P62962 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.63■□□□□ 0.09
Pfn1P62962 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pfn1P62962 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pfn1P62962 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pfn1P62962 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pfn1P62962 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pfn1P62962 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pfn1P62962 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pfn1P62962 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pfn1P62962 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pfn1P62962 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pfn1P62962 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pfn1P62962 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pfn1P62962 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.62■□□□□ 0.09
Pfn1P62962 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pfn1P62962 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pfn1P62962 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.62■□□□□ 0.09
Pfn1P62962 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pfn1P62962 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pfn1P62962 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pfn1P62962 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pfn1P62962 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.62■□□□□ 0.09
Pfn1P62962 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pfn1P62962 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pfn1P62962 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pfn1P62962 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pfn1P62962 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pfn1P62962 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pfn1P62962 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.61■□□□□ 0.09
Pfn1P62962 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pfn1P62962 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pfn1P62962 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pfn1P62962 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Pfn1P62962 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pfn1P62962 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.61■□□□□ 0.09
Pfn1P62962 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pfn1P62962 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pfn1P62962 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.61■□□□□ 0.09
Pfn1P62962 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pfn1P62962 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pfn1P62962 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pfn1P62962 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pfn1P62962 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pfn1P62962 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pfn1P62962 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pfn1P62962 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pfn1P62962 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pfn1P62962 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pfn1P62962 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pfn1P62962 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pfn1P62962 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pfn1P62962 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pfn1P62962 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pfn1P62962 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Pfn1P62962 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pfn1P62962 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pfn1P62962 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pfn1P62962 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pfn1P62962 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pfn1P62962 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pfn1P62962 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Pfn1P62962 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pfn1P62962 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pfn1P62962 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pfn1P62962 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pfn1P62962 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pfn1P62962 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pfn1P62962 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pfn1P62962 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pfn1P62962 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pfn1P62962 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Pfn1P62962 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pfn1P62962 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pfn1P62962 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pfn1P62962 Gm9806-201ENSMUST00000051080 552 ntBASIC15.58■□□□□ 0.08
Pfn1P62962 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pfn1P62962 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pfn1P62962 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pfn1P62962 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms