Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Mir6236-201ENSMUST00000184437 123 ntBASIC21.38■■□□□ 1.01
Gm11236J3QMS7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.38■■□□□ 1.01
Gm11236J3QMS7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm11236J3QMS7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Gm11236J3QMS7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Gm11236J3QMS7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Gm11236J3QMS7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Gm11236J3QMS7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm11236J3QMS7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.38■■□□□ 1.01
Gm11236J3QMS7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11236J3QMS7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11236J3QMS7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11236J3QMS7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Gm11236J3QMS7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11236J3QMS7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11236J3QMS7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm11236J3QMS7 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.36■■□□□ 1.01
Gm11236J3QMS7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.36■■□□□ 1.01
Gm11236J3QMS7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.36■■□□□ 1.01
Gm11236J3QMS7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Gm11236J3QMS7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.35■■□□□ 1.01
Gm11236J3QMS7 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.35■■□□□ 1.01
Gm11236J3QMS7 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Gm11236J3QMS7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11236J3QMS7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11236J3QMS7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11236J3QMS7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11236J3QMS7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11236J3QMS7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11236J3QMS7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.34■■□□□ 1.01
Gm11236J3QMS7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11236J3QMS7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm11236J3QMS7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm11236J3QMS7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm11236J3QMS7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm11236J3QMS7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.33■■□□□ 1
Gm11236J3QMS7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.33■■□□□ 1
Gm11236J3QMS7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm11236J3QMS7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm11236J3QMS7 Gm42642-201ENSMUST00000200683 355 ntBASIC21.32■■□□□ 1
Gm11236J3QMS7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm11236J3QMS7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.32■■□□□ 1
Gm11236J3QMS7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm11236J3QMS7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm11236J3QMS7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm11236J3QMS7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm11236J3QMS7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.31■■□□□ 1
Gm11236J3QMS7 Gm7291-201ENSMUST00000199147 382 ntBASIC21.31■■□□□ 1
Gm11236J3QMS7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm11236J3QMS7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.31■■□□□ 1
Gm11236J3QMS7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm11236J3QMS7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm11236J3QMS7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
Gm11236J3QMS7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Gm11236J3QMS7 Gm10849-201ENSMUST00000100397 618 ntBASIC21.3■■□□□ 1
Gm11236J3QMS7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm11236J3QMS7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gm11236J3QMS7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.3■■□□□ 1
Gm11236J3QMS7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Gm11236J3QMS7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Gm11236J3QMS7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm11236J3QMS7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm11236J3QMS7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm11236J3QMS7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm11236J3QMS7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm11236J3QMS7 Gm11421-201ENSMUST00000122124 294 ntBASIC21.29■■□□□ 1
Gm11236J3QMS7 Gm26571-201ENSMUST00000181399 666 ntBASIC21.29■■□□□ 1
Gm11236J3QMS7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm11236J3QMS7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Gm11236J3QMS7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Gm11236J3QMS7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm11236J3QMS7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm11236J3QMS7 Gm27405-201ENSMUST00000184201 112 ntBASIC21.28■■□□□ 1
Gm11236J3QMS7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm11236J3QMS7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.28■■□□□ 1
Gm11236J3QMS7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.27■■□□□ 1
Gm11236J3QMS7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm11236J3QMS7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm11236J3QMS7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm11236J3QMS7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.27■■□□□ 1
Gm11236J3QMS7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm11236J3QMS7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Gm11236J3QMS7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm11236J3QMS7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Gm11236J3QMS7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm11236J3QMS7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gm11236J3QMS7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm11236J3QMS7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm11236J3QMS7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms