Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.45■□□□□ 0.06
Trbv17A0A140T8P8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.45■□□□□ 0.06
Trbv17A0A140T8P8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trbv17A0A140T8P8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv17A0A140T8P8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv17A0A140T8P8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv17A0A140T8P8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv17A0A140T8P8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv17A0A140T8P8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv17A0A140T8P8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv17A0A140T8P8 Gm14117-201ENSMUST00000122417 843 ntBASIC15.44■□□□□ 0.06
Trbv17A0A140T8P8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv17A0A140T8P8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv17A0A140T8P8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.44■□□□□ 0.06
Trbv17A0A140T8P8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv17A0A140T8P8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.44■□□□□ 0.06
Trbv17A0A140T8P8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.44■□□□□ 0.06
Trbv17A0A140T8P8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv17A0A140T8P8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv17A0A140T8P8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv17A0A140T8P8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv17A0A140T8P8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv17A0A140T8P8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv17A0A140T8P8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv17A0A140T8P8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv17A0A140T8P8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv17A0A140T8P8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trbv17A0A140T8P8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv17A0A140T8P8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
Trbv17A0A140T8P8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv17A0A140T8P8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv17A0A140T8P8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.42■□□□□ 0.06
Trbv17A0A140T8P8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.42■□□□□ 0.06
Trbv17A0A140T8P8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv17A0A140T8P8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv17A0A140T8P8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv17A0A140T8P8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv17A0A140T8P8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv17A0A140T8P8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Trbv17A0A140T8P8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv17A0A140T8P8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv17A0A140T8P8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trbv17A0A140T8P8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv17A0A140T8P8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv17A0A140T8P8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trbv17A0A140T8P8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.41■□□□□ 0.06
Trbv17A0A140T8P8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv17A0A140T8P8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv17A0A140T8P8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv17A0A140T8P8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv17A0A140T8P8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv17A0A140T8P8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv17A0A140T8P8 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.4■□□□□ 0.06
Trbv17A0A140T8P8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv17A0A140T8P8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv17A0A140T8P8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv17A0A140T8P8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv17A0A140T8P8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv17A0A140T8P8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv17A0A140T8P8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.39■□□□□ 0.05
Trbv17A0A140T8P8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv17A0A140T8P8 Gm45102-201ENSMUST00000207427 857 ntBASIC15.39■□□□□ 0.05
Trbv17A0A140T8P8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv17A0A140T8P8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv17A0A140T8P8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv17A0A140T8P8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv17A0A140T8P8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.39■□□□□ 0.05
Trbv17A0A140T8P8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv17A0A140T8P8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv17A0A140T8P8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv17A0A140T8P8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trbv17A0A140T8P8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv17A0A140T8P8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv17A0A140T8P8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv17A0A140T8P8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.38■□□□□ 0.05
Trbv17A0A140T8P8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv17A0A140T8P8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv17A0A140T8P8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv17A0A140T8P8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv17A0A140T8P8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.38■□□□□ 0.05
Trbv17A0A140T8P8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv17A0A140T8P8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv17A0A140T8P8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms