Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Trav6d-7A0A075B6B0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6d-7A0A075B6B0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.55■□□□□ 0.08
Trav6d-7A0A075B6B0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6d-7A0A075B6B0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6d-7A0A075B6B0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-7A0A075B6B0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-7A0A075B6B0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-7A0A075B6B0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav6d-7A0A075B6B0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.54■□□□□ 0.08
Trav6d-7A0A075B6B0 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.54■□□□□ 0.08
Trav6d-7A0A075B6B0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-7A0A075B6B0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav6d-7A0A075B6B0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-7A0A075B6B0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-7A0A075B6B0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav6d-7A0A075B6B0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-7A0A075B6B0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-7A0A075B6B0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Trav6d-7A0A075B6B0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav6d-7A0A075B6B0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-7A0A075B6B0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-7A0A075B6B0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-7A0A075B6B0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-7A0A075B6B0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-7A0A075B6B0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-7A0A075B6B0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-7A0A075B6B0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-7A0A075B6B0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-7A0A075B6B0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6d-7A0A075B6B0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav6d-7A0A075B6B0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav6d-7A0A075B6B0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6d-7A0A075B6B0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav6d-7A0A075B6B0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav6d-7A0A075B6B0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6d-7A0A075B6B0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6d-7A0A075B6B0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6d-7A0A075B6B0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6d-7A0A075B6B0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6d-7A0A075B6B0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6d-7A0A075B6B0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Trav6d-7A0A075B6B0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trav6d-7A0A075B6B0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6d-7A0A075B6B0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6d-7A0A075B6B0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-7A0A075B6B0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-7A0A075B6B0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-7A0A075B6B0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-7A0A075B6B0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.51■□□□□ 0.07
Trav6d-7A0A075B6B0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.51■□□□□ 0.07
Trav6d-7A0A075B6B0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav6d-7A0A075B6B0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-7A0A075B6B0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-7A0A075B6B0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-7A0A075B6B0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-7A0A075B6B0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-7A0A075B6B0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-7A0A075B6B0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-7A0A075B6B0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav6d-7A0A075B6B0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav6d-7A0A075B6B0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-7A0A075B6B0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.5■□□□□ 0.07
Trav6d-7A0A075B6B0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-7A0A075B6B0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-7A0A075B6B0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-7A0A075B6B0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-7A0A075B6B0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-7A0A075B6B0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-7A0A075B6B0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav6d-7A0A075B6B0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-7A0A075B6B0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-7A0A075B6B0 Golph3-202ENSMUST00000226517 2359 ntBASIC15.48■□□□□ 0.07
Trav6d-7A0A075B6B0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-7A0A075B6B0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-7A0A075B6B0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-7A0A075B6B0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.48■□□□□ 0.07
Trav6d-7A0A075B6B0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav6d-7A0A075B6B0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-7A0A075B6B0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-7A0A075B6B0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms