Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav8n-2A0A075B633 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav8n-2A0A075B633 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.63■□□□□ 0.57
Trav8n-2A0A075B633 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav8n-2A0A075B633 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav8n-2A0A075B633 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Trav8n-2A0A075B633 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav8n-2A0A075B633 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav8n-2A0A075B633 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav8n-2A0A075B633 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.62■□□□□ 0.57
Trav8n-2A0A075B633 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav8n-2A0A075B633 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav8n-2A0A075B633 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav8n-2A0A075B633 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav8n-2A0A075B633 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav8n-2A0A075B633 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav8n-2A0A075B633 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav8n-2A0A075B633 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trav8n-2A0A075B633 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav8n-2A0A075B633 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trav8n-2A0A075B633 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav8n-2A0A075B633 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav8n-2A0A075B633 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav8n-2A0A075B633 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.6■□□□□ 0.57
Trav8n-2A0A075B633 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav8n-2A0A075B633 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.6■□□□□ 0.57
Trav8n-2A0A075B633 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav8n-2A0A075B633 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trav8n-2A0A075B633 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav8n-2A0A075B633 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav8n-2A0A075B633 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Trav8n-2A0A075B633 AV356131-201ENSMUST00000206201 750 ntBASIC18.6■□□□□ 0.57
Trav8n-2A0A075B633 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav8n-2A0A075B633 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav8n-2A0A075B633 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav8n-2A0A075B633 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav8n-2A0A075B633 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trav8n-2A0A075B633 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav8n-2A0A075B633 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav8n-2A0A075B633 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav8n-2A0A075B633 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav8n-2A0A075B633 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav8n-2A0A075B633 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav8n-2A0A075B633 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav8n-2A0A075B633 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav8n-2A0A075B633 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav8n-2A0A075B633 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav8n-2A0A075B633 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trav8n-2A0A075B633 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.58■□□□□ 0.57
Trav8n-2A0A075B633 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trav8n-2A0A075B633 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav8n-2A0A075B633 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav8n-2A0A075B633 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav8n-2A0A075B633 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav8n-2A0A075B633 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav8n-2A0A075B633 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav8n-2A0A075B633 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.58■□□□□ 0.56
Trav8n-2A0A075B633 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trav8n-2A0A075B633 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav8n-2A0A075B633 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav8n-2A0A075B633 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav8n-2A0A075B633 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav8n-2A0A075B633 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav8n-2A0A075B633 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trav8n-2A0A075B633 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.57■□□□□ 0.56
Trav8n-2A0A075B633 Gm10033-202ENSMUST00000211874 928 ntBASIC18.57■□□□□ 0.56
Trav8n-2A0A075B633 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav8n-2A0A075B633 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.57■□□□□ 0.56
Trav8n-2A0A075B633 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav8n-2A0A075B633 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.56■□□□□ 0.56
Trav8n-2A0A075B633 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav8n-2A0A075B633 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav8n-2A0A075B633 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav8n-2A0A075B633 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav8n-2A0A075B633 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.56■□□□□ 0.56
Trav8n-2A0A075B633 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav8n-2A0A075B633 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav8n-2A0A075B633 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.56■□□□□ 0.56
Trav8n-2A0A075B633 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav8n-2A0A075B633 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav8n-2A0A075B633 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trav8n-2A0A075B633 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav8n-2A0A075B633 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav8n-2A0A075B633 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.55■□□□□ 0.56
Trav8n-2A0A075B633 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav8n-2A0A075B633 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav8n-2A0A075B633 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trav8n-2A0A075B633 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav8n-2A0A075B633 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav8n-2A0A075B633 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav8n-2A0A075B633 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav8n-2A0A075B633 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav8n-2A0A075B633 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.54■□□□□ 0.56
Trav8n-2A0A075B633 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.54■□□□□ 0.56
Trav8n-2A0A075B633 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav8n-2A0A075B633 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav8n-2A0A075B633 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav8n-2A0A075B633 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav8n-2A0A075B633 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trav8n-2A0A075B633 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms