Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mbd3l1Q9D9H3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mbd3l1Q9D9H3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.6■□□□□ 0.41
Mbd3l1Q9D9H3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mbd3l1Q9D9H3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mbd3l1Q9D9H3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Mbd3l1Q9D9H3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mbd3l1Q9D9H3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mbd3l1Q9D9H3 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.6■□□□□ 0.41
Mbd3l1Q9D9H3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mbd3l1Q9D9H3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.6■□□□□ 0.41
Mbd3l1Q9D9H3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mbd3l1Q9D9H3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mbd3l1Q9D9H3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mbd3l1Q9D9H3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mbd3l1Q9D9H3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Mbd3l1Q9D9H3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mbd3l1Q9D9H3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mbd3l1Q9D9H3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mbd3l1Q9D9H3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mbd3l1Q9D9H3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mbd3l1Q9D9H3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Mbd3l1Q9D9H3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mbd3l1Q9D9H3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Mbd3l1Q9D9H3 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.58■□□□□ 0.41
Mbd3l1Q9D9H3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mbd3l1Q9D9H3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mbd3l1Q9D9H3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Mbd3l1Q9D9H3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Mbd3l1Q9D9H3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mbd3l1Q9D9H3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mbd3l1Q9D9H3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mbd3l1Q9D9H3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mbd3l1Q9D9H3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mbd3l1Q9D9H3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.58■□□□□ 0.4
Mbd3l1Q9D9H3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.58■□□□□ 0.4
Mbd3l1Q9D9H3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mbd3l1Q9D9H3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mbd3l1Q9D9H3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mbd3l1Q9D9H3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mbd3l1Q9D9H3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.57■□□□□ 0.4
Mbd3l1Q9D9H3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mbd3l1Q9D9H3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Mbd3l1Q9D9H3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mbd3l1Q9D9H3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mbd3l1Q9D9H3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.57■□□□□ 0.4
Mbd3l1Q9D9H3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mbd3l1Q9D9H3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mbd3l1Q9D9H3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mbd3l1Q9D9H3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mbd3l1Q9D9H3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Mbd3l1Q9D9H3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mbd3l1Q9D9H3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Mbd3l1Q9D9H3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mbd3l1Q9D9H3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd3l1Q9D9H3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd3l1Q9D9H3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd3l1Q9D9H3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd3l1Q9D9H3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd3l1Q9D9H3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd3l1Q9D9H3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd3l1Q9D9H3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd3l1Q9D9H3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd3l1Q9D9H3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd3l1Q9D9H3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd3l1Q9D9H3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd3l1Q9D9H3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd3l1Q9D9H3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.54■□□□□ 0.4
Mbd3l1Q9D9H3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd3l1Q9D9H3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd3l1Q9D9H3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd3l1Q9D9H3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd3l1Q9D9H3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd3l1Q9D9H3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd3l1Q9D9H3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Mbd3l1Q9D9H3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd3l1Q9D9H3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Mbd3l1Q9D9H3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd3l1Q9D9H3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd3l1Q9D9H3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd3l1Q9D9H3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Mbd3l1Q9D9H3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd3l1Q9D9H3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd3l1Q9D9H3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd3l1Q9D9H3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd3l1Q9D9H3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd3l1Q9D9H3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd3l1Q9D9H3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd3l1Q9D9H3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.53■□□□□ 0.4
Mbd3l1Q9D9H3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Mbd3l1Q9D9H3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd3l1Q9D9H3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Mbd3l1Q9D9H3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mbd3l1Q9D9H3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mbd3l1Q9D9H3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.52■□□□□ 0.4
Mbd3l1Q9D9H3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.52■□□□□ 0.4
Mbd3l1Q9D9H3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mbd3l1Q9D9H3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mbd3l1Q9D9H3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mbd3l1Q9D9H3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms