Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb1Q91XX8 Serp2-204ENSMUST00000228055 705 ntBASIC21.13■□□□□ 0.97
Pcdhgb1Q91XX8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdhgb1Q91XX8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb1Q91XX8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb1Q91XX8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb1Q91XX8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb1Q91XX8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgb1Q91XX8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgb1Q91XX8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.12■□□□□ 0.97
Pcdhgb1Q91XX8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Pcdhgb1Q91XX8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.12■□□□□ 0.97
Pcdhgb1Q91XX8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgb1Q91XX8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgb1Q91XX8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdhgb1Q91XX8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Pcdhgb1Q91XX8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgb1Q91XX8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgb1Q91XX8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgb1Q91XX8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgb1Q91XX8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgb1Q91XX8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgb1Q91XX8 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.1■□□□□ 0.97
Pcdhgb1Q91XX8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgb1Q91XX8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgb1Q91XX8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.09■□□□□ 0.97
Pcdhgb1Q91XX8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdhgb1Q91XX8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgb1Q91XX8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgb1Q91XX8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgb1Q91XX8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgb1Q91XX8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.09■□□□□ 0.97
Pcdhgb1Q91XX8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Pcdhgb1Q91XX8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgb1Q91XX8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgb1Q91XX8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgb1Q91XX8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgb1Q91XX8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Pcdhgb1Q91XX8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhgb1Q91XX8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhgb1Q91XX8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.08■□□□□ 0.97
Pcdhgb1Q91XX8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.08■□□□□ 0.97
Pcdhgb1Q91XX8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.08■□□□□ 0.97
Pcdhgb1Q91XX8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhgb1Q91XX8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhgb1Q91XX8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgb1Q91XX8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgb1Q91XX8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgb1Q91XX8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Pcdhgb1Q91XX8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgb1Q91XX8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgb1Q91XX8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgb1Q91XX8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcdhgb1Q91XX8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgb1Q91XX8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgb1Q91XX8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgb1Q91XX8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgb1Q91XX8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgb1Q91XX8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgb1Q91XX8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgb1Q91XX8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Pcdhgb1Q91XX8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgb1Q91XX8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgb1Q91XX8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pcdhgb1Q91XX8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgb1Q91XX8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgb1Q91XX8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Pcdhgb1Q91XX8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Pcdhgb1Q91XX8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgb1Q91XX8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgb1Q91XX8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgb1Q91XX8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgb1Q91XX8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgb1Q91XX8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgb1Q91XX8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.03■□□□□ 0.96
Pcdhgb1Q91XX8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgb1Q91XX8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgb1Q91XX8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgb1Q91XX8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgb1Q91XX8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgb1Q91XX8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Pcdhgb1Q91XX8 Mir7075-201ENSMUST00000184187 82 ntBASIC21.02■□□□□ 0.96
Pcdhgb1Q91XX8 Gm43530-201ENSMUST00000195920 274 ntBASIC21.02■□□□□ 0.96
Pcdhgb1Q91XX8 Gm6139-201ENSMUST00000079261 882 ntBASIC21.02■□□□□ 0.96
Pcdhgb1Q91XX8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgb1Q91XX8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Pcdhgb1Q91XX8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhgb1Q91XX8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgb1Q91XX8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhgb1Q91XX8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.01■□□□□ 0.95
Pcdhgb1Q91XX8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgb1Q91XX8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgb1Q91XX8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Pcdhgb1Q91XX8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcdhgb1Q91XX8 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.01■□□□□ 0.95
Pcdhgb1Q91XX8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgb1Q91XX8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgb1Q91XX8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb1Q91XX8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Pcdhgb1Q91XX8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms