Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim60Q8VI40 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Trim60Q8VI40 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim60Q8VI40 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim60Q8VI40 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim60Q8VI40 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim60Q8VI40 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim60Q8VI40 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim60Q8VI40 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim60Q8VI40 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim60Q8VI40 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim60Q8VI40 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim60Q8VI40 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim60Q8VI40 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim60Q8VI40 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim60Q8VI40 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21■□□□□ 0.95
Trim60Q8VI40 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim60Q8VI40 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim60Q8VI40 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trim60Q8VI40 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21■□□□□ 0.95
Trim60Q8VI40 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim60Q8VI40 Gm34220-201ENSMUST00000223001 2709 ntBASIC21■□□□□ 0.95
Trim60Q8VI40 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim60Q8VI40 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21■□□□□ 0.95
Trim60Q8VI40 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim60Q8VI40 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim60Q8VI40 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim60Q8VI40 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim60Q8VI40 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.99■□□□□ 0.95
Trim60Q8VI40 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim60Q8VI40 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim60Q8VI40 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim60Q8VI40 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim60Q8VI40 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trim60Q8VI40 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.98■□□□□ 0.95
Trim60Q8VI40 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim60Q8VI40 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim60Q8VI40 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Trim60Q8VI40 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Trim60Q8VI40 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim60Q8VI40 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.98■□□□□ 0.95
Trim60Q8VI40 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim60Q8VI40 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim60Q8VI40 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim60Q8VI40 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim60Q8VI40 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.97■□□□□ 0.95
Trim60Q8VI40 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim60Q8VI40 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim60Q8VI40 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim60Q8VI40 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim60Q8VI40 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim60Q8VI40 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim60Q8VI40 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim60Q8VI40 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim60Q8VI40 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim60Q8VI40 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim60Q8VI40 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim60Q8VI40 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim60Q8VI40 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim60Q8VI40 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim60Q8VI40 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim60Q8VI40 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim60Q8VI40 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Trim60Q8VI40 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trim60Q8VI40 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim60Q8VI40 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim60Q8VI40 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim60Q8VI40 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim60Q8VI40 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim60Q8VI40 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim60Q8VI40 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim60Q8VI40 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim60Q8VI40 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.95■□□□□ 0.94
Trim60Q8VI40 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim60Q8VI40 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim60Q8VI40 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.95■□□□□ 0.94
Trim60Q8VI40 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trim60Q8VI40 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim60Q8VI40 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.94■□□□□ 0.94
Trim60Q8VI40 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim60Q8VI40 Gm43566-201ENSMUST00000196851 808 ntBASIC20.94■□□□□ 0.94
Trim60Q8VI40 Gm10399-202ENSMUST00000202768 748 ntBASIC20.94■□□□□ 0.94
Trim60Q8VI40 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.94■□□□□ 0.94
Trim60Q8VI40 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim60Q8VI40 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Trim60Q8VI40 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim60Q8VI40 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim60Q8VI40 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim60Q8VI40 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim60Q8VI40 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim60Q8VI40 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim60Q8VI40 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim60Q8VI40 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim60Q8VI40 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim60Q8VI40 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim60Q8VI40 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim60Q8VI40 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim60Q8VI40 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim60Q8VI40 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim60Q8VI40 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms