Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC25.12■■□□□ 1.61
Smc4Q8CG47 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Smc4Q8CG47 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Smc4Q8CG47 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Smc4Q8CG47 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC25.11■■□□□ 1.61
Smc4Q8CG47 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Smc4Q8CG47 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Smc4Q8CG47 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC25.11■■□□□ 1.61
Smc4Q8CG47 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Smc4Q8CG47 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Smc4Q8CG47 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC25.1■■□□□ 1.61
Smc4Q8CG47 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Smc4Q8CG47 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC25.1■■□□□ 1.61
Smc4Q8CG47 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Smc4Q8CG47 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC25.1■■□□□ 1.61
Smc4Q8CG47 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Smc4Q8CG47 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Smc4Q8CG47 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC25.1■■□□□ 1.61
Smc4Q8CG47 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Smc4Q8CG47 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Smc4Q8CG47 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Smc4Q8CG47 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC25.09■■□□□ 1.61
Smc4Q8CG47 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Smc4Q8CG47 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Smc4Q8CG47 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
Smc4Q8CG47 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Smc4Q8CG47 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Smc4Q8CG47 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC25.08■■□□□ 1.61
Smc4Q8CG47 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC25.08■■□□□ 1.61
Smc4Q8CG47 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC25.08■■□□□ 1.61
Smc4Q8CG47 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Smc4Q8CG47 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC25.08■■□□□ 1.61
Smc4Q8CG47 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Smc4Q8CG47 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC25.07■■□□□ 1.6
Smc4Q8CG47 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Smc4Q8CG47 Gm8493-201ENSMUST00000196881 489 ntBASIC25.06■■□□□ 1.6
Smc4Q8CG47 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Smc4Q8CG47 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Smc4Q8CG47 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Smc4Q8CG47 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Smc4Q8CG47 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
Smc4Q8CG47 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Smc4Q8CG47 Wdr70-203ENSMUST00000227371 1130 ntBASIC25.05■■□□□ 1.6
Smc4Q8CG47 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Smc4Q8CG47 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Smc4Q8CG47 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Smc4Q8CG47 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC25.04■■□□□ 1.6
Smc4Q8CG47 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Smc4Q8CG47 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
Smc4Q8CG47 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC25.04■■□□□ 1.6
Smc4Q8CG47 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC25.03■■□□□ 1.6
Smc4Q8CG47 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Smc4Q8CG47 Gm7160-202ENSMUST00000188519 1027 ntBASIC25.03■■□□□ 1.6
Smc4Q8CG47 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC25.03■■□□□ 1.6
Smc4Q8CG47 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Smc4Q8CG47 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Smc4Q8CG47 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Smc4Q8CG47 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Smc4Q8CG47 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Smc4Q8CG47 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Smc4Q8CG47 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Smc4Q8CG47 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC25.01■■□□□ 1.59
Smc4Q8CG47 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Smc4Q8CG47 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Smc4Q8CG47 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC25■■□□□ 1.59
Smc4Q8CG47 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
Smc4Q8CG47 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Smc4Q8CG47 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC25■■□□□ 1.59
Smc4Q8CG47 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Smc4Q8CG47 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Smc4Q8CG47 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC25■■□□□ 1.59
Smc4Q8CG47 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC25■■□□□ 1.59
Smc4Q8CG47 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Smc4Q8CG47 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC25■■□□□ 1.59
Smc4Q8CG47 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Smc4Q8CG47 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Smc4Q8CG47 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Smc4Q8CG47 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Smc4Q8CG47 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Smc4Q8CG47 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Smc4Q8CG47 AC122428.2-201ENSMUST00000216321 1832 ntBASIC24.99■■□□□ 1.59
Smc4Q8CG47 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC24.99■■□□□ 1.59
Smc4Q8CG47 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Smc4Q8CG47 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms