Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf38bQ80SY5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf38bQ80SY5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf38bQ80SY5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf38bQ80SY5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf38bQ80SY5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf38bQ80SY5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf38bQ80SY5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf38bQ80SY5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf38bQ80SY5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Prpf38bQ80SY5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.16■□□□□ 0.98
Prpf38bQ80SY5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf38bQ80SY5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf38bQ80SY5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Prpf38bQ80SY5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf38bQ80SY5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf38bQ80SY5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf38bQ80SY5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf38bQ80SY5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf38bQ80SY5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf38bQ80SY5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf38bQ80SY5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.15■□□□□ 0.98
Prpf38bQ80SY5 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf38bQ80SY5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf38bQ80SY5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf38bQ80SY5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf38bQ80SY5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf38bQ80SY5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf38bQ80SY5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf38bQ80SY5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf38bQ80SY5 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.13■□□□□ 0.97
Prpf38bQ80SY5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf38bQ80SY5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf38bQ80SY5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf38bQ80SY5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf38bQ80SY5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf38bQ80SY5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf38bQ80SY5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.12■□□□□ 0.97
Prpf38bQ80SY5 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.12■□□□□ 0.97
Prpf38bQ80SY5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.12■□□□□ 0.97
Prpf38bQ80SY5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf38bQ80SY5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.12■□□□□ 0.97
Prpf38bQ80SY5 Spcs1-204ENSMUST00000226782 949 ntBASIC21.12■□□□□ 0.97
Prpf38bQ80SY5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Prpf38bQ80SY5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf38bQ80SY5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf38bQ80SY5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf38bQ80SY5 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf38bQ80SY5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf38bQ80SY5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.11■□□□□ 0.97
Prpf38bQ80SY5 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf38bQ80SY5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf38bQ80SY5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf38bQ80SY5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf38bQ80SY5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf38bQ80SY5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf38bQ80SY5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf38bQ80SY5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf38bQ80SY5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38bQ80SY5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38bQ80SY5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38bQ80SY5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38bQ80SY5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38bQ80SY5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38bQ80SY5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Prpf38bQ80SY5 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.09■□□□□ 0.97
Prpf38bQ80SY5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf38bQ80SY5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf38bQ80SY5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf38bQ80SY5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf38bQ80SY5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Prpf38bQ80SY5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf38bQ80SY5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf38bQ80SY5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf38bQ80SY5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf38bQ80SY5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf38bQ80SY5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf38bQ80SY5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf38bQ80SY5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.08■□□□□ 0.97
Prpf38bQ80SY5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Prpf38bQ80SY5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Prpf38bQ80SY5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Prpf38bQ80SY5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Prpf38bQ80SY5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Prpf38bQ80SY5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf38bQ80SY5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf38bQ80SY5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf38bQ80SY5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf38bQ80SY5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
Prpf38bQ80SY5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf38bQ80SY5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf38bQ80SY5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf38bQ80SY5 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.06■□□□□ 0.96
Prpf38bQ80SY5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf38bQ80SY5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf38bQ80SY5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Prpf38bQ80SY5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf38bQ80SY5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Prpf38bQ80SY5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.06■□□□□ 0.96
Prpf38bQ80SY5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms