Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trim63Q38HM4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim63Q38HM4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim63Q38HM4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trim63Q38HM4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim63Q38HM4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim63Q38HM4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim63Q38HM4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim63Q38HM4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim63Q38HM4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim63Q38HM4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.85■□□□□ 0.29
Trim63Q38HM4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim63Q38HM4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim63Q38HM4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim63Q38HM4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.85■□□□□ 0.29
Trim63Q38HM4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim63Q38HM4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim63Q38HM4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim63Q38HM4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim63Q38HM4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim63Q38HM4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim63Q38HM4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim63Q38HM4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim63Q38HM4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim63Q38HM4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim63Q38HM4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim63Q38HM4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim63Q38HM4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim63Q38HM4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim63Q38HM4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim63Q38HM4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim63Q38HM4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim63Q38HM4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim63Q38HM4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.82■□□□□ 0.28
Trim63Q38HM4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim63Q38HM4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim63Q38HM4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim63Q38HM4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim63Q38HM4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim63Q38HM4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim63Q38HM4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim63Q38HM4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim63Q38HM4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim63Q38HM4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim63Q38HM4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim63Q38HM4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim63Q38HM4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Trim63Q38HM4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim63Q38HM4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim63Q38HM4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim63Q38HM4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim63Q38HM4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim63Q38HM4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim63Q38HM4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim63Q38HM4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim63Q38HM4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim63Q38HM4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim63Q38HM4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim63Q38HM4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim63Q38HM4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim63Q38HM4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim63Q38HM4 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.8■□□□□ 0.28
Trim63Q38HM4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim63Q38HM4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim63Q38HM4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim63Q38HM4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim63Q38HM4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Trim63Q38HM4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim63Q38HM4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim63Q38HM4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim63Q38HM4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim63Q38HM4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim63Q38HM4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim63Q38HM4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim63Q38HM4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Trim63Q38HM4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim63Q38HM4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim63Q38HM4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim63Q38HM4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim63Q38HM4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim63Q38HM4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim63Q38HM4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim63Q38HM4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim63Q38HM4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim63Q38HM4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim63Q38HM4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim63Q38HM4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim63Q38HM4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim63Q38HM4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim63Q38HM4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim63Q38HM4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim63Q38HM4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim63Q38HM4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim63Q38HM4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim63Q38HM4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim63Q38HM4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim63Q38HM4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim63Q38HM4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim63Q38HM4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim63Q38HM4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms