Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm12251-201ENSMUST00000117893 792 ntBASIC21.69■■□□□ 1.06
NrlP54846 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NrlP54846 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NrlP54846 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NrlP54846 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NrlP54846 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.68■■□□□ 1.06
NrlP54846 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
NrlP54846 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NrlP54846 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NrlP54846 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NrlP54846 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NrlP54846 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NrlP54846 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NrlP54846 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NrlP54846 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NrlP54846 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.67■■□□□ 1.06
NrlP54846 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
NrlP54846 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NrlP54846 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NrlP54846 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NrlP54846 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NrlP54846 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.66■■□□□ 1.06
NrlP54846 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NrlP54846 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.66■■□□□ 1.06
NrlP54846 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
NrlP54846 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NrlP54846 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
NrlP54846 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NrlP54846 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.65■■□□□ 1.06
NrlP54846 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.65■■□□□ 1.06
NrlP54846 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
NrlP54846 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.65■■□□□ 1.06
NrlP54846 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NrlP54846 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NrlP54846 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.64■■□□□ 1.06
NrlP54846 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NrlP54846 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NrlP54846 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NrlP54846 Gm43530-201ENSMUST00000195920 274 ntBASIC21.64■■□□□ 1.05
NrlP54846 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NrlP54846 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.64■■□□□ 1.05
NrlP54846 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NrlP54846 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NrlP54846 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NrlP54846 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NrlP54846 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NrlP54846 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NrlP54846 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.63■■□□□ 1.05
NrlP54846 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NrlP54846 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NrlP54846 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
NrlP54846 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NrlP54846 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NrlP54846 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NrlP54846 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NrlP54846 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NrlP54846 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.62■■□□□ 1.05
NrlP54846 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
NrlP54846 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NrlP54846 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NrlP54846 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.61■■□□□ 1.05
NrlP54846 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.61■■□□□ 1.05
NrlP54846 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
NrlP54846 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.61■■□□□ 1.05
NrlP54846 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NrlP54846 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
NrlP54846 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
NrlP54846 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NrlP54846 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
NrlP54846 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
NrlP54846 Spcs1-204ENSMUST00000226782 949 ntBASIC21.6■■□□□ 1.05
NrlP54846 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NrlP54846 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
NrlP54846 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NrlP54846 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NrlP54846 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NrlP54846 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NrlP54846 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NrlP54846 Gm26833-201ENSMUST00000180899 440 ntBASIC21.59■■□□□ 1.05
NrlP54846 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
NrlP54846 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NrlP54846 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NrlP54846 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NrlP54846 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NrlP54846 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
NrlP54846 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
NrlP54846 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NrlP54846 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NrlP54846 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NrlP54846 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NrlP54846 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NrlP54846 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NrlP54846 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NrlP54846 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.57■■□□□ 1.04
NrlP54846 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.57■■□□□ 1.04
NrlP54846 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NrlP54846 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NrlP54846 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NrlP54846 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NrlP54846 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms