Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
P06320 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
P06320 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06320 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P06320 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06320 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
P06320 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06320 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC12.8□□□□□ -0.36
P06320 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06320 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
P06320 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06320 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06320 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
P06320 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
P06320 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06320 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06320 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06320 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
P06320 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P06320 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
P06320 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06320 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P06320 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P06320 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06320 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06320 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06320 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06320 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06320 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P06320 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06320 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P06320 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P06320 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
P06320 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06320 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06320 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
P06320 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06320 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P06320 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
P06320 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC12.78□□□□□ -0.36
P06320 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06320 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06320 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
P06320 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
P06320 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06320 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P06320 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P06320 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
P06320 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P06320 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
P06320 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P06320 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
P06320 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06320 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
P06320 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06320 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06320 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06320 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
P06320 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06320 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06320 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
P06320 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06320 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P06320 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06320 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06320 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
P06320 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
P06320 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
P06320 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06320 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
P06320 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06320 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06320 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC12.76□□□□□ -0.37
P06320 Gm44428-201ENSMUST00000204474 874 ntBASIC12.76□□□□□ -0.37
P06320 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06320 Pkd1-207ENSMUST00000228550 1050 ntBASIC12.76□□□□□ -0.37
P06320 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06320 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
P06320 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06320 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06320 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06320 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms