Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SncaO55042 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.75■□□□□ 0.27
SncaO55042 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SncaO55042 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SncaO55042 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SncaO55042 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SncaO55042 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SncaO55042 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SncaO55042 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SncaO55042 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SncaO55042 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SncaO55042 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SncaO55042 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SncaO55042 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SncaO55042 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SncaO55042 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SncaO55042 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SncaO55042 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SncaO55042 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SncaO55042 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SncaO55042 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SncaO55042 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SncaO55042 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SncaO55042 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SncaO55042 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SncaO55042 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SncaO55042 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SncaO55042 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SncaO55042 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SncaO55042 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SncaO55042 Iqck-206ENSMUST00000208658 2891 ntBASIC16.73■□□□□ 0.27
SncaO55042 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SncaO55042 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SncaO55042 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SncaO55042 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SncaO55042 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SncaO55042 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SncaO55042 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SncaO55042 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SncaO55042 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.72■□□□□ 0.27
SncaO55042 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SncaO55042 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SncaO55042 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SncaO55042 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SncaO55042 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SncaO55042 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SncaO55042 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SncaO55042 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SncaO55042 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SncaO55042 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SncaO55042 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.71■□□□□ 0.27
SncaO55042 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SncaO55042 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SncaO55042 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SncaO55042 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.71■□□□□ 0.27
SncaO55042 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SncaO55042 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SncaO55042 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SncaO55042 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SncaO55042 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.71■□□□□ 0.27
SncaO55042 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SncaO55042 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
SncaO55042 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
SncaO55042 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SncaO55042 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.7■□□□□ 0.26
SncaO55042 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SncaO55042 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SncaO55042 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.7■□□□□ 0.26
SncaO55042 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SncaO55042 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SncaO55042 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SncaO55042 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SncaO55042 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.7■□□□□ 0.26
SncaO55042 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SncaO55042 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SncaO55042 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SncaO55042 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SncaO55042 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SncaO55042 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SncaO55042 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SncaO55042 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SncaO55042 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SncaO55042 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SncaO55042 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SncaO55042 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.69■□□□□ 0.26
SncaO55042 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SncaO55042 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SncaO55042 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SncaO55042 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SncaO55042 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SncaO55042 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.69■□□□□ 0.26
SncaO55042 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SncaO55042 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SncaO55042 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SncaO55042 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SncaO55042 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SncaO55042 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SncaO55042 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SncaO55042 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.68■□□□□ 0.26
SncaO55042 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms