Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.7■■□□□ 1.06
Sh2d4bA6X942 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sh2d4bA6X942 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sh2d4bA6X942 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sh2d4bA6X942 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sh2d4bA6X942 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sh2d4bA6X942 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh2d4bA6X942 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh2d4bA6X942 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.69■■□□□ 1.06
Sh2d4bA6X942 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh2d4bA6X942 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh2d4bA6X942 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh2d4bA6X942 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Sh2d4bA6X942 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh2d4bA6X942 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh2d4bA6X942 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh2d4bA6X942 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Sh2d4bA6X942 Gm8493-201ENSMUST00000196881 489 ntBASIC21.68■■□□□ 1.06
Sh2d4bA6X942 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.68■■□□□ 1.06
Sh2d4bA6X942 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sh2d4bA6X942 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh2d4bA6X942 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh2d4bA6X942 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh2d4bA6X942 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.68■■□□□ 1.06
Sh2d4bA6X942 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh2d4bA6X942 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh2d4bA6X942 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
Sh2d4bA6X942 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh2d4bA6X942 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh2d4bA6X942 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sh2d4bA6X942 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.67■■□□□ 1.06
Sh2d4bA6X942 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh2d4bA6X942 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Sh2d4bA6X942 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.67■■□□□ 1.06
Sh2d4bA6X942 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sh2d4bA6X942 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh2d4bA6X942 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh2d4bA6X942 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh2d4bA6X942 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh2d4bA6X942 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sh2d4bA6X942 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.66■■□□□ 1.06
Sh2d4bA6X942 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.66■■□□□ 1.06
Sh2d4bA6X942 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh2d4bA6X942 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh2d4bA6X942 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh2d4bA6X942 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh2d4bA6X942 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh2d4bA6X942 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sh2d4bA6X942 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh2d4bA6X942 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.65■■□□□ 1.06
Sh2d4bA6X942 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.65■■□□□ 1.06
Sh2d4bA6X942 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Sh2d4bA6X942 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.65■■□□□ 1.06
Sh2d4bA6X942 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh2d4bA6X942 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh2d4bA6X942 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sh2d4bA6X942 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh2d4bA6X942 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh2d4bA6X942 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sh2d4bA6X942 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh2d4bA6X942 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.64■■□□□ 1.05
Sh2d4bA6X942 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.64■■□□□ 1.05
Sh2d4bA6X942 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.64■■□□□ 1.05
Sh2d4bA6X942 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.64■■□□□ 1.05
Sh2d4bA6X942 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh2d4bA6X942 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sh2d4bA6X942 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh2d4bA6X942 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh2d4bA6X942 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh2d4bA6X942 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh2d4bA6X942 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Sh2d4bA6X942 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sh2d4bA6X942 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh2d4bA6X942 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Sh2d4bA6X942 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.62■■□□□ 1.05
Sh2d4bA6X942 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Sh2d4bA6X942 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.62■■□□□ 1.05
Sh2d4bA6X942 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sh2d4bA6X942 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh2d4bA6X942 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh2d4bA6X942 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh2d4bA6X942 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Sh2d4bA6X942 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh2d4bA6X942 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh2d4bA6X942 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.61■■□□□ 1.05
Sh2d4bA6X942 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.61■■□□□ 1.05
Sh2d4bA6X942 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh2d4bA6X942 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh2d4bA6X942 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sh2d4bA6X942 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh2d4bA6X942 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Sh2d4bA6X942 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sh2d4bA6X942 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.6■■□□□ 1.05
Sh2d4bA6X942 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
Sh2d4bA6X942 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sh2d4bA6X942 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.6■■□□□ 1.05
Sh2d4bA6X942 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sh2d4bA6X942 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.6■■□□□ 1.05
Sh2d4bA6X942 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sh2d4bA6X942 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms