Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim17A0A504 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.39■□□□□ 0.53
Smim17A0A504 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smim17A0A504 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim17A0A504 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.39■□□□□ 0.53
Smim17A0A504 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Smim17A0A504 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smim17A0A504 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smim17A0A504 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smim17A0A504 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smim17A0A504 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.38■□□□□ 0.53
Smim17A0A504 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.38■□□□□ 0.53
Smim17A0A504 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.38■□□□□ 0.53
Smim17A0A504 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smim17A0A504 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smim17A0A504 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smim17A0A504 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Smim17A0A504 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smim17A0A504 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim17A0A504 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.37■□□□□ 0.53
Smim17A0A504 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim17A0A504 Terc-201ENSMUST00000082862 423 ntBASIC18.37■□□□□ 0.53
Smim17A0A504 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim17A0A504 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim17A0A504 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim17A0A504 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim17A0A504 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.37■□□□□ 0.53
Smim17A0A504 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smim17A0A504 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smim17A0A504 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.36■□□□□ 0.53
Smim17A0A504 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smim17A0A504 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smim17A0A504 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smim17A0A504 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smim17A0A504 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smim17A0A504 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.35■□□□□ 0.53
Smim17A0A504 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.35■□□□□ 0.53
Smim17A0A504 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smim17A0A504 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Smim17A0A504 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Smim17A0A504 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.35■□□□□ 0.53
Smim17A0A504 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smim17A0A504 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smim17A0A504 Golph3-205ENSMUST00000228671 2842 ntBASIC18.35■□□□□ 0.53
Smim17A0A504 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim17A0A504 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim17A0A504 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Smim17A0A504 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim17A0A504 Gm4799-201ENSMUST00000095396 657 ntBASIC18.34■□□□□ 0.53
Smim17A0A504 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim17A0A504 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim17A0A504 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Smim17A0A504 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smim17A0A504 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smim17A0A504 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smim17A0A504 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Smim17A0A504 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smim17A0A504 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smim17A0A504 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smim17A0A504 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smim17A0A504 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.33■□□□□ 0.52
Smim17A0A504 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smim17A0A504 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Smim17A0A504 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smim17A0A504 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smim17A0A504 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smim17A0A504 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Smim17A0A504 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.32■□□□□ 0.52
Smim17A0A504 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smim17A0A504 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smim17A0A504 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smim17A0A504 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smim17A0A504 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smim17A0A504 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smim17A0A504 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smim17A0A504 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.32■□□□□ 0.52
Smim17A0A504 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smim17A0A504 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smim17A0A504 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smim17A0A504 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smim17A0A504 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.31■□□□□ 0.52
Smim17A0A504 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.31■□□□□ 0.52
Smim17A0A504 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Smim17A0A504 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smim17A0A504 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smim17A0A504 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smim17A0A504 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.3■□□□□ 0.52
Smim17A0A504 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smim17A0A504 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smim17A0A504 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Smim17A0A504 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Smim17A0A504 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.3■□□□□ 0.52
Smim17A0A504 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.3■□□□□ 0.52
Smim17A0A504 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smim17A0A504 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Smim17A0A504 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smim17A0A504 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smim17A0A504 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Smim17A0A504 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Smim17A0A504 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 784.9 ms