Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7-5A0A0G2JFX6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav7-5A0A0G2JFX6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav7-5A0A0G2JFX6 Gm7143-201ENSMUST00000222811 859 ntBASIC15.94■□□□□ 0.14
Trav7-5A0A0G2JFX6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav7-5A0A0G2JFX6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
Trav7-5A0A0G2JFX6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7-5A0A0G2JFX6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7-5A0A0G2JFX6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7-5A0A0G2JFX6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.93■□□□□ 0.14
Trav7-5A0A0G2JFX6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7-5A0A0G2JFX6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7-5A0A0G2JFX6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7-5A0A0G2JFX6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav7-5A0A0G2JFX6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Trav7-5A0A0G2JFX6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.93■□□□□ 0.14
Trav7-5A0A0G2JFX6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav7-5A0A0G2JFX6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7-5A0A0G2JFX6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7-5A0A0G2JFX6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7-5A0A0G2JFX6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7-5A0A0G2JFX6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7-5A0A0G2JFX6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7-5A0A0G2JFX6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7-5A0A0G2JFX6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7-5A0A0G2JFX6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.92■□□□□ 0.14
Trav7-5A0A0G2JFX6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7-5A0A0G2JFX6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7-5A0A0G2JFX6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav7-5A0A0G2JFX6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7-5A0A0G2JFX6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav7-5A0A0G2JFX6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.91■□□□□ 0.14
Trav7-5A0A0G2JFX6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-5A0A0G2JFX6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-5A0A0G2JFX6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
Trav7-5A0A0G2JFX6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-5A0A0G2JFX6 Gm9870-201ENSMUST00000063874 645 ntBASIC15.91■□□□□ 0.14
Trav7-5A0A0G2JFX6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav7-5A0A0G2JFX6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-5A0A0G2JFX6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-5A0A0G2JFX6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-5A0A0G2JFX6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-5A0A0G2JFX6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-5A0A0G2JFX6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav7-5A0A0G2JFX6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-5A0A0G2JFX6 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.9■□□□□ 0.14
Trav7-5A0A0G2JFX6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-5A0A0G2JFX6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-5A0A0G2JFX6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trav7-5A0A0G2JFX6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav7-5A0A0G2JFX6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-5A0A0G2JFX6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-5A0A0G2JFX6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav7-5A0A0G2JFX6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Trav7-5A0A0G2JFX6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav7-5A0A0G2JFX6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7-5A0A0G2JFX6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav7-5A0A0G2JFX6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7-5A0A0G2JFX6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7-5A0A0G2JFX6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7-5A0A0G2JFX6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-5A0A0G2JFX6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-5A0A0G2JFX6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-5A0A0G2JFX6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-5A0A0G2JFX6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-5A0A0G2JFX6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-5A0A0G2JFX6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-5A0A0G2JFX6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav7-5A0A0G2JFX6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-5A0A0G2JFX6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-5A0A0G2JFX6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Gm12922-201ENSMUST00000120626 809 ntBASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-5A0A0G2JFX6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-5A0A0G2JFX6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav7-5A0A0G2JFX6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-5A0A0G2JFX6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-5A0A0G2JFX6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-5A0A0G2JFX6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-5A0A0G2JFX6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.86■□□□□ 0.13
Trav7-5A0A0G2JFX6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.86■□□□□ 0.13
Trav7-5A0A0G2JFX6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-5A0A0G2JFX6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Trav7-5A0A0G2JFX6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms