Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv30A0A0B4J1P1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv30A0A0B4J1P1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv30A0A0B4J1P1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.29■□□□□ 0.04
Trbv30A0A0B4J1P1 Gm7143-201ENSMUST00000222811 859 ntBASIC15.29■□□□□ 0.04
Trbv30A0A0B4J1P1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv30A0A0B4J1P1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trbv30A0A0B4J1P1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv30A0A0B4J1P1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Trbv30A0A0B4J1P1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv30A0A0B4J1P1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv30A0A0B4J1P1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv30A0A0B4J1P1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv30A0A0B4J1P1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv30A0A0B4J1P1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trbv30A0A0B4J1P1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv30A0A0B4J1P1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv30A0A0B4J1P1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv30A0A0B4J1P1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv30A0A0B4J1P1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Trbv30A0A0B4J1P1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.27■□□□□ 0.04
Trbv30A0A0B4J1P1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Trbv30A0A0B4J1P1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv30A0A0B4J1P1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv30A0A0B4J1P1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv30A0A0B4J1P1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv30A0A0B4J1P1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv30A0A0B4J1P1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv30A0A0B4J1P1 Gm9870-201ENSMUST00000063874 645 ntBASIC15.26■□□□□ 0.03
Trbv30A0A0B4J1P1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv30A0A0B4J1P1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv30A0A0B4J1P1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv30A0A0B4J1P1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv30A0A0B4J1P1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv30A0A0B4J1P1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trbv30A0A0B4J1P1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv30A0A0B4J1P1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.25■□□□□ 0.03
Trbv30A0A0B4J1P1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv30A0A0B4J1P1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv30A0A0B4J1P1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
Trbv30A0A0B4J1P1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv30A0A0B4J1P1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv30A0A0B4J1P1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv30A0A0B4J1P1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv30A0A0B4J1P1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv30A0A0B4J1P1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv30A0A0B4J1P1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv30A0A0B4J1P1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv30A0A0B4J1P1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Trbv30A0A0B4J1P1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv30A0A0B4J1P1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.24■□□□□ 0.03
Trbv30A0A0B4J1P1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.24■□□□□ 0.03
Trbv30A0A0B4J1P1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv30A0A0B4J1P1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv30A0A0B4J1P1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv30A0A0B4J1P1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trbv30A0A0B4J1P1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv30A0A0B4J1P1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv30A0A0B4J1P1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.23■□□□□ 0.03
Trbv30A0A0B4J1P1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv30A0A0B4J1P1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv30A0A0B4J1P1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trbv30A0A0B4J1P1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv30A0A0B4J1P1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
Trbv30A0A0B4J1P1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv30A0A0B4J1P1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv30A0A0B4J1P1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.22■□□□□ 0.03
Trbv30A0A0B4J1P1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv30A0A0B4J1P1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
Trbv30A0A0B4J1P1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv30A0A0B4J1P1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv30A0A0B4J1P1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv30A0A0B4J1P1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv30A0A0B4J1P1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv30A0A0B4J1P1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv30A0A0B4J1P1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trbv30A0A0B4J1P1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv30A0A0B4J1P1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv30A0A0B4J1P1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.21■□□□□ 0.03
Trbv30A0A0B4J1P1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Trbv30A0A0B4J1P1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.21■□□□□ 0.03
Trbv30A0A0B4J1P1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.21■□□□□ 0.03
Trbv30A0A0B4J1P1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms