Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn13Q9Z0S4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn13Q9Z0S4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn13Q9Z0S4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Cldn13Q9Z0S4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cldn13Q9Z0S4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn13Q9Z0S4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn13Q9Z0S4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn13Q9Z0S4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn13Q9Z0S4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn13Q9Z0S4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn13Q9Z0S4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn13Q9Z0S4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn13Q9Z0S4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.18■□□□□ 0.5
Cldn13Q9Z0S4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.18■□□□□ 0.5
Cldn13Q9Z0S4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn13Q9Z0S4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn13Q9Z0S4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn13Q9Z0S4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn13Q9Z0S4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn13Q9Z0S4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cldn13Q9Z0S4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn13Q9Z0S4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn13Q9Z0S4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cldn13Q9Z0S4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn13Q9Z0S4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cldn13Q9Z0S4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn13Q9Z0S4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn13Q9Z0S4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn13Q9Z0S4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn13Q9Z0S4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cldn13Q9Z0S4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn13Q9Z0S4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn13Q9Z0S4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cldn13Q9Z0S4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn13Q9Z0S4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn13Q9Z0S4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn13Q9Z0S4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn13Q9Z0S4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn13Q9Z0S4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn13Q9Z0S4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.16■□□□□ 0.5
Cldn13Q9Z0S4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn13Q9Z0S4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn13Q9Z0S4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn13Q9Z0S4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn13Q9Z0S4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn13Q9Z0S4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.15■□□□□ 0.5
Cldn13Q9Z0S4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn13Q9Z0S4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.15■□□□□ 0.5
Cldn13Q9Z0S4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn13Q9Z0S4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn13Q9Z0S4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn13Q9Z0S4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn13Q9Z0S4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn13Q9Z0S4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cldn13Q9Z0S4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn13Q9Z0S4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cldn13Q9Z0S4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn13Q9Z0S4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.14■□□□□ 0.49
Cldn13Q9Z0S4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn13Q9Z0S4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn13Q9Z0S4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn13Q9Z0S4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.14■□□□□ 0.49
Cldn13Q9Z0S4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn13Q9Z0S4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn13Q9Z0S4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cldn13Q9Z0S4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn13Q9Z0S4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn13Q9Z0S4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn13Q9Z0S4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn13Q9Z0S4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.13■□□□□ 0.49
Cldn13Q9Z0S4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.13■□□□□ 0.49
Cldn13Q9Z0S4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cldn13Q9Z0S4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.13■□□□□ 0.49
Cldn13Q9Z0S4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn13Q9Z0S4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn13Q9Z0S4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cldn13Q9Z0S4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn13Q9Z0S4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.12■□□□□ 0.49
Cldn13Q9Z0S4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.12■□□□□ 0.49
Cldn13Q9Z0S4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn13Q9Z0S4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn13Q9Z0S4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn13Q9Z0S4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn13Q9Z0S4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn13Q9Z0S4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn13Q9Z0S4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.11■□□□□ 0.49
Cldn13Q9Z0S4 Gm22238-201ENSMUST00000175222 88 ntBASIC18.11■□□□□ 0.49
Cldn13Q9Z0S4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.11■□□□□ 0.49
Cldn13Q9Z0S4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn13Q9Z0S4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Cldn13Q9Z0S4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn13Q9Z0S4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn13Q9Z0S4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cldn13Q9Z0S4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn13Q9Z0S4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn13Q9Z0S4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cldn13Q9Z0S4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cldn13Q9Z0S4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn13Q9Z0S4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms