Protein–RNA interactions for Protein: Q9Z0E3

Aire, Autoimmune regulator, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AireQ9Z0E3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AireQ9Z0E3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AireQ9Z0E3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AireQ9Z0E3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
AireQ9Z0E3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
AireQ9Z0E3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AireQ9Z0E3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
AireQ9Z0E3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
AireQ9Z0E3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AireQ9Z0E3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AireQ9Z0E3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AireQ9Z0E3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AireQ9Z0E3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
AireQ9Z0E3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
AireQ9Z0E3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
AireQ9Z0E3 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.07■□□□□ 0.48
AireQ9Z0E3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
AireQ9Z0E3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
AireQ9Z0E3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AireQ9Z0E3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
AireQ9Z0E3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
AireQ9Z0E3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AireQ9Z0E3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AireQ9Z0E3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AireQ9Z0E3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AireQ9Z0E3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
AireQ9Z0E3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AireQ9Z0E3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AireQ9Z0E3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.06■□□□□ 0.48
AireQ9Z0E3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AireQ9Z0E3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AireQ9Z0E3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
AireQ9Z0E3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
AireQ9Z0E3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AireQ9Z0E3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.06■□□□□ 0.48
AireQ9Z0E3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.05■□□□□ 0.48
AireQ9Z0E3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.05■□□□□ 0.48
AireQ9Z0E3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
AireQ9Z0E3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
AireQ9Z0E3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AireQ9Z0E3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.05■□□□□ 0.48
AireQ9Z0E3 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.05■□□□□ 0.48
AireQ9Z0E3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.05■□□□□ 0.48
AireQ9Z0E3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AireQ9Z0E3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
AireQ9Z0E3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
AireQ9Z0E3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
AireQ9Z0E3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AireQ9Z0E3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
AireQ9Z0E3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
AireQ9Z0E3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AireQ9Z0E3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AireQ9Z0E3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.04■□□□□ 0.48
AireQ9Z0E3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.04■□□□□ 0.48
AireQ9Z0E3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AireQ9Z0E3 Golph3-202ENSMUST00000226517 2359 ntBASIC18.03■□□□□ 0.48
AireQ9Z0E3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
AireQ9Z0E3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
AireQ9Z0E3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.03■□□□□ 0.48
AireQ9Z0E3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.03■□□□□ 0.48
AireQ9Z0E3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.03■□□□□ 0.48
AireQ9Z0E3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.03■□□□□ 0.48
AireQ9Z0E3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.03■□□□□ 0.48
AireQ9Z0E3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AireQ9Z0E3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AireQ9Z0E3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.03■□□□□ 0.48
AireQ9Z0E3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
AireQ9Z0E3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AireQ9Z0E3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.02■□□□□ 0.48
AireQ9Z0E3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.02■□□□□ 0.48
AireQ9Z0E3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AireQ9Z0E3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
AireQ9Z0E3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AireQ9Z0E3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AireQ9Z0E3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AireQ9Z0E3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
AireQ9Z0E3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
AireQ9Z0E3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AireQ9Z0E3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
AireQ9Z0E3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
AireQ9Z0E3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AireQ9Z0E3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AireQ9Z0E3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.01■□□□□ 0.47
AireQ9Z0E3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.01■□□□□ 0.47
AireQ9Z0E3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AireQ9Z0E3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AireQ9Z0E3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AireQ9Z0E3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AireQ9Z0E3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AireQ9Z0E3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AireQ9Z0E3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AireQ9Z0E3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AireQ9Z0E3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AireQ9Z0E3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AireQ9Z0E3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18■□□□□ 0.47
AireQ9Z0E3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
AireQ9Z0E3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
AireQ9Z0E3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18■□□□□ 0.47
AireQ9Z0E3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
AireQ9Z0E3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 262.5 ms