Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mbd3l1Q9D9H3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mbd3l1Q9D9H3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Mbd3l1Q9D9H3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mbd3l1Q9D9H3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Mbd3l1Q9D9H3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mbd3l1Q9D9H3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mbd3l1Q9D9H3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mbd3l1Q9D9H3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mbd3l1Q9D9H3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Mbd3l1Q9D9H3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mbd3l1Q9D9H3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mbd3l1Q9D9H3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mbd3l1Q9D9H3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mbd3l1Q9D9H3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mbd3l1Q9D9H3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Mbd3l1Q9D9H3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mbd3l1Q9D9H3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mbd3l1Q9D9H3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mbd3l1Q9D9H3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mbd3l1Q9D9H3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mbd3l1Q9D9H3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mbd3l1Q9D9H3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mbd3l1Q9D9H3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mbd3l1Q9D9H3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Mbd3l1Q9D9H3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mbd3l1Q9D9H3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Mbd3l1Q9D9H3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mbd3l1Q9D9H3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mbd3l1Q9D9H3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.66■□□□□ 0.42
Mbd3l1Q9D9H3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mbd3l1Q9D9H3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mbd3l1Q9D9H3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Mbd3l1Q9D9H3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mbd3l1Q9D9H3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mbd3l1Q9D9H3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Mbd3l1Q9D9H3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mbd3l1Q9D9H3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mbd3l1Q9D9H3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mbd3l1Q9D9H3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mbd3l1Q9D9H3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mbd3l1Q9D9H3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Mbd3l1Q9D9H3 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.65■□□□□ 0.42
Mbd3l1Q9D9H3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mbd3l1Q9D9H3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mbd3l1Q9D9H3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mbd3l1Q9D9H3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mbd3l1Q9D9H3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mbd3l1Q9D9H3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mbd3l1Q9D9H3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Mbd3l1Q9D9H3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mbd3l1Q9D9H3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mbd3l1Q9D9H3 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.64■□□□□ 0.41
Mbd3l1Q9D9H3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mbd3l1Q9D9H3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mbd3l1Q9D9H3 Golph3-205ENSMUST00000228671 2842 ntBASIC17.64■□□□□ 0.41
Mbd3l1Q9D9H3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mbd3l1Q9D9H3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mbd3l1Q9D9H3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Mbd3l1Q9D9H3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mbd3l1Q9D9H3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mbd3l1Q9D9H3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mbd3l1Q9D9H3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Mbd3l1Q9D9H3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Mbd3l1Q9D9H3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mbd3l1Q9D9H3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mbd3l1Q9D9H3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mbd3l1Q9D9H3 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.63■□□□□ 0.41
Mbd3l1Q9D9H3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mbd3l1Q9D9H3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Mbd3l1Q9D9H3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Mbd3l1Q9D9H3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Mbd3l1Q9D9H3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mbd3l1Q9D9H3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mbd3l1Q9D9H3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Mbd3l1Q9D9H3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mbd3l1Q9D9H3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mbd3l1Q9D9H3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mbd3l1Q9D9H3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mbd3l1Q9D9H3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mbd3l1Q9D9H3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.62■□□□□ 0.41
Mbd3l1Q9D9H3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mbd3l1Q9D9H3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mbd3l1Q9D9H3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Mbd3l1Q9D9H3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.62■□□□□ 0.41
Mbd3l1Q9D9H3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mbd3l1Q9D9H3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Mbd3l1Q9D9H3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.61■□□□□ 0.41
Mbd3l1Q9D9H3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mbd3l1Q9D9H3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mbd3l1Q9D9H3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mbd3l1Q9D9H3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mbd3l1Q9D9H3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Mbd3l1Q9D9H3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mbd3l1Q9D9H3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mbd3l1Q9D9H3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mbd3l1Q9D9H3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mbd3l1Q9D9H3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mbd3l1Q9D9H3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mbd3l1Q9D9H3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms