Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nck1Q99M51 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Nck1Q99M51 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nck1Q99M51 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Nck1Q99M51 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nck1Q99M51 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nck1Q99M51 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Nck1Q99M51 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nck1Q99M51 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nck1Q99M51 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nck1Q99M51 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.47■□□□□ 0.71
Nck1Q99M51 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nck1Q99M51 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Nck1Q99M51 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nck1Q99M51 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nck1Q99M51 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nck1Q99M51 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nck1Q99M51 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nck1Q99M51 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nck1Q99M51 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nck1Q99M51 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nck1Q99M51 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nck1Q99M51 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nck1Q99M51 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nck1Q99M51 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nck1Q99M51 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nck1Q99M51 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nck1Q99M51 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nck1Q99M51 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nck1Q99M51 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nck1Q99M51 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.45■□□□□ 0.7
Nck1Q99M51 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.45■□□□□ 0.7
Nck1Q99M51 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.45■□□□□ 0.7
Nck1Q99M51 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nck1Q99M51 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nck1Q99M51 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nck1Q99M51 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nck1Q99M51 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nck1Q99M51 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nck1Q99M51 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nck1Q99M51 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nck1Q99M51 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Nck1Q99M51 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nck1Q99M51 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.43■□□□□ 0.7
Nck1Q99M51 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.43■□□□□ 0.7
Nck1Q99M51 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nck1Q99M51 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nck1Q99M51 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nck1Q99M51 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.43■□□□□ 0.7
Nck1Q99M51 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.43■□□□□ 0.7
Nck1Q99M51 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nck1Q99M51 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nck1Q99M51 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nck1Q99M51 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nck1Q99M51 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nck1Q99M51 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nck1Q99M51 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.42■□□□□ 0.7
Nck1Q99M51 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nck1Q99M51 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nck1Q99M51 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.42■□□□□ 0.7
Nck1Q99M51 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nck1Q99M51 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nck1Q99M51 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nck1Q99M51 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nck1Q99M51 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nck1Q99M51 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nck1Q99M51 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nck1Q99M51 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nck1Q99M51 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nck1Q99M51 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Nck1Q99M51 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nck1Q99M51 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nck1Q99M51 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.41■□□□□ 0.7
Nck1Q99M51 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.41■□□□□ 0.7
Nck1Q99M51 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Nck1Q99M51 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nck1Q99M51 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.41■□□□□ 0.7
Nck1Q99M51 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nck1Q99M51 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nck1Q99M51 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nck1Q99M51 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nck1Q99M51 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nck1Q99M51 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nck1Q99M51 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nck1Q99M51 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.4■□□□□ 0.7
Nck1Q99M51 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nck1Q99M51 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nck1Q99M51 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.4■□□□□ 0.7
Nck1Q99M51 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nck1Q99M51 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nck1Q99M51 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nck1Q99M51 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nck1Q99M51 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.39■□□□□ 0.69
Nck1Q99M51 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.39■□□□□ 0.69
Nck1Q99M51 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nck1Q99M51 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nck1Q99M51 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.39■□□□□ 0.69
Nck1Q99M51 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nck1Q99M51 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nck1Q99M51 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms