Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.69■■□□□ 1.22
Usp6nlQ80XC3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Usp6nlQ80XC3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Usp6nlQ80XC3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Usp6nlQ80XC3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22.68■■□□□ 1.22
Usp6nlQ80XC3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Usp6nlQ80XC3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Usp6nlQ80XC3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Usp6nlQ80XC3 Gm10493-201ENSMUST00000097270 612 ntBASIC22.68■■□□□ 1.22
Usp6nlQ80XC3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
Usp6nlQ80XC3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Usp6nlQ80XC3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Usp6nlQ80XC3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC22.67■■□□□ 1.22
Usp6nlQ80XC3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Usp6nlQ80XC3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Usp6nlQ80XC3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Usp6nlQ80XC3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Usp6nlQ80XC3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Usp6nlQ80XC3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Usp6nlQ80XC3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Usp6nlQ80XC3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Usp6nlQ80XC3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.67■■□□□ 1.22
Usp6nlQ80XC3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Usp6nlQ80XC3 Gm26571-201ENSMUST00000181399 666 ntBASIC22.66■■□□□ 1.22
Usp6nlQ80XC3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.66■■□□□ 1.22
Usp6nlQ80XC3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Usp6nlQ80XC3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Usp6nlQ80XC3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Usp6nlQ80XC3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.66■■□□□ 1.22
Usp6nlQ80XC3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Usp6nlQ80XC3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Usp6nlQ80XC3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Usp6nlQ80XC3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.66■■□□□ 1.22
Usp6nlQ80XC3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Usp6nlQ80XC3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Usp6nlQ80XC3 Gm7291-201ENSMUST00000199147 382 ntBASIC22.65■■□□□ 1.22
Usp6nlQ80XC3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Usp6nlQ80XC3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Usp6nlQ80XC3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Usp6nlQ80XC3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.65■■□□□ 1.22
Usp6nlQ80XC3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Usp6nlQ80XC3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Usp6nlQ80XC3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Usp6nlQ80XC3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Usp6nlQ80XC3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Usp6nlQ80XC3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC22.64■■□□□ 1.21
Usp6nlQ80XC3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Usp6nlQ80XC3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Usp6nlQ80XC3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Usp6nlQ80XC3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.63■■□□□ 1.21
Usp6nlQ80XC3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Usp6nlQ80XC3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Usp6nlQ80XC3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC22.63■■□□□ 1.21
Usp6nlQ80XC3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Usp6nlQ80XC3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.63■■□□□ 1.21
Usp6nlQ80XC3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.62■■□□□ 1.21
Usp6nlQ80XC3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Usp6nlQ80XC3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Usp6nlQ80XC3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Usp6nlQ80XC3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Usp6nlQ80XC3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Usp6nlQ80XC3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC22.62■■□□□ 1.21
Usp6nlQ80XC3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.62■■□□□ 1.21
Usp6nlQ80XC3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Usp6nlQ80XC3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Usp6nlQ80XC3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
Usp6nlQ80XC3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Usp6nlQ80XC3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Usp6nlQ80XC3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Usp6nlQ80XC3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Usp6nlQ80XC3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Usp6nlQ80XC3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Usp6nlQ80XC3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Usp6nlQ80XC3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Usp6nlQ80XC3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Usp6nlQ80XC3 Gm10209-201ENSMUST00000203397 1607 ntBASIC22.6■■□□□ 1.21
Usp6nlQ80XC3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp6nlQ80XC3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp6nlQ80XC3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp6nlQ80XC3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
Usp6nlQ80XC3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.6■■□□□ 1.21
Usp6nlQ80XC3 Smad6-203ENSMUST00000179458 273 ntBASIC22.6■■□□□ 1.21
Usp6nlQ80XC3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.6■■□□□ 1.21
Usp6nlQ80XC3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Usp6nlQ80XC3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp6nlQ80XC3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Usp6nlQ80XC3 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.59■■□□□ 1.21
Usp6nlQ80XC3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Usp6nlQ80XC3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Usp6nlQ80XC3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Usp6nlQ80XC3 Gm10849-201ENSMUST00000100397 618 ntBASIC22.59■■□□□ 1.21
Usp6nlQ80XC3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Usp6nlQ80XC3 Gm40848-201ENSMUST00000221998 324 ntBASIC22.59■■□□□ 1.21
Usp6nlQ80XC3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Usp6nlQ80XC3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.59■■□□□ 1.21
Usp6nlQ80XC3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Usp6nlQ80XC3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Usp6nlQ80XC3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Usp6nlQ80XC3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Usp6nlQ80XC3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms