Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13bQ80TY5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13bQ80TY5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13bQ80TY5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13bQ80TY5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13bQ80TY5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.5□□□□□ -0.41
Vps13bQ80TY5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.5□□□□□ -0.41
Vps13bQ80TY5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.5□□□□□ -0.41
Vps13bQ80TY5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13bQ80TY5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13bQ80TY5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13bQ80TY5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13bQ80TY5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.49□□□□□ -0.41
Vps13bQ80TY5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps13bQ80TY5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13bQ80TY5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13bQ80TY5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13bQ80TY5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13bQ80TY5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13bQ80TY5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13bQ80TY5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps13bQ80TY5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13bQ80TY5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.49□□□□□ -0.41
Vps13bQ80TY5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13bQ80TY5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Vps13bQ80TY5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13bQ80TY5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.48□□□□□ -0.41
Vps13bQ80TY5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps13bQ80TY5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13bQ80TY5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13bQ80TY5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vps13bQ80TY5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13bQ80TY5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Vps13bQ80TY5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Vps13bQ80TY5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.47□□□□□ -0.41
Vps13bQ80TY5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.47□□□□□ -0.41
Vps13bQ80TY5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13bQ80TY5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC12.47□□□□□ -0.41
Vps13bQ80TY5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC12.47□□□□□ -0.41
Vps13bQ80TY5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC12.47□□□□□ -0.41
Vps13bQ80TY5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.47□□□□□ -0.41
Vps13bQ80TY5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13bQ80TY5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13bQ80TY5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13bQ80TY5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps13bQ80TY5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps13bQ80TY5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps13bQ80TY5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC12.46□□□□□ -0.41
Vps13bQ80TY5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps13bQ80TY5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps13bQ80TY5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Vps13bQ80TY5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps13bQ80TY5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.45□□□□□ -0.42
Vps13bQ80TY5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps13bQ80TY5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps13bQ80TY5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps13bQ80TY5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps13bQ80TY5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.45□□□□□ -0.42
Vps13bQ80TY5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps13bQ80TY5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps13bQ80TY5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps13bQ80TY5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps13bQ80TY5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps13bQ80TY5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps13bQ80TY5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Vps13bQ80TY5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Vps13bQ80TY5 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.45□□□□□ -0.42
Vps13bQ80TY5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps13bQ80TY5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC12.44□□□□□ -0.42
Vps13bQ80TY5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13bQ80TY5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC12.44□□□□□ -0.42
Vps13bQ80TY5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13bQ80TY5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.44□□□□□ -0.42
Vps13bQ80TY5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.44□□□□□ -0.42
Vps13bQ80TY5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Vps13bQ80TY5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.44□□□□□ -0.42
Vps13bQ80TY5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13bQ80TY5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC12.44□□□□□ -0.42
Vps13bQ80TY5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13bQ80TY5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.44□□□□□ -0.42
Vps13bQ80TY5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13bQ80TY5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps13bQ80TY5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps13bQ80TY5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms