Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
Kdm3aQ6PCM1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Kdm3aQ6PCM1 Gm32051-202ENSMUST00000197905 2385 ntBASIC24.79■■□□□ 1.56
Kdm3aQ6PCM1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Kdm3aQ6PCM1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Kdm3aQ6PCM1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Kdm3aQ6PCM1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Kdm3aQ6PCM1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Kdm3aQ6PCM1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Kdm3aQ6PCM1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Kdm3aQ6PCM1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC24.78■■□□□ 1.56
Kdm3aQ6PCM1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Kdm3aQ6PCM1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC24.78■■□□□ 1.56
Kdm3aQ6PCM1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Kdm3aQ6PCM1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Kdm3aQ6PCM1 Gm43137-201ENSMUST00000198052 594 ntBASIC24.77■■□□□ 1.56
Kdm3aQ6PCM1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Kdm3aQ6PCM1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Kdm3aQ6PCM1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Kdm3aQ6PCM1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Kdm3aQ6PCM1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Kdm3aQ6PCM1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Kdm3aQ6PCM1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC24.76■■□□□ 1.55
Kdm3aQ6PCM1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Kdm3aQ6PCM1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Kdm3aQ6PCM1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Kdm3aQ6PCM1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC24.75■■□□□ 1.55
Kdm3aQ6PCM1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Kdm3aQ6PCM1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC24.75■■□□□ 1.55
Kdm3aQ6PCM1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Kdm3aQ6PCM1 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.75■■□□□ 1.55
Kdm3aQ6PCM1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
Kdm3aQ6PCM1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Kdm3aQ6PCM1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Kdm3aQ6PCM1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Kdm3aQ6PCM1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Kdm3aQ6PCM1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Kdm3aQ6PCM1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Kdm3aQ6PCM1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Kdm3aQ6PCM1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.74■■□□□ 1.55
Kdm3aQ6PCM1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC24.74■■□□□ 1.55
Kdm3aQ6PCM1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC24.74■■□□□ 1.55
Kdm3aQ6PCM1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC24.74■■□□□ 1.55
Kdm3aQ6PCM1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Kdm3aQ6PCM1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Kdm3aQ6PCM1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Kdm3aQ6PCM1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.73■■□□□ 1.55
Kdm3aQ6PCM1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Kdm3aQ6PCM1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Kdm3aQ6PCM1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC24.73■■□□□ 1.55
Kdm3aQ6PCM1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Kdm3aQ6PCM1 Gm5576-201ENSMUST00000075809 1236 ntBASIC24.73■■□□□ 1.55
Kdm3aQ6PCM1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Kdm3aQ6PCM1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Kdm3aQ6PCM1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Kdm3aQ6PCM1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Kdm3aQ6PCM1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC24.73■■□□□ 1.55
Kdm3aQ6PCM1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Kdm3aQ6PCM1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Kdm3aQ6PCM1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Kdm3aQ6PCM1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Kdm3aQ6PCM1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC24.72■■□□□ 1.55
Kdm3aQ6PCM1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Kdm3aQ6PCM1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Kdm3aQ6PCM1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Kdm3aQ6PCM1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Kdm3aQ6PCM1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Kdm3aQ6PCM1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Kdm3aQ6PCM1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Kdm3aQ6PCM1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Kdm3aQ6PCM1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Kdm3aQ6PCM1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Kdm3aQ6PCM1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC24.71■■□□□ 1.55
Kdm3aQ6PCM1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Kdm3aQ6PCM1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Kdm3aQ6PCM1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Kdm3aQ6PCM1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Kdm3aQ6PCM1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC24.7■■□□□ 1.54
Kdm3aQ6PCM1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC24.7■■□□□ 1.54
Kdm3aQ6PCM1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC24.7■■□□□ 1.54
Kdm3aQ6PCM1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC24.7■■□□□ 1.54
Kdm3aQ6PCM1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Kdm3aQ6PCM1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Kdm3aQ6PCM1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC24.69■■□□□ 1.54
Kdm3aQ6PCM1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Kdm3aQ6PCM1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Kdm3aQ6PCM1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Kdm3aQ6PCM1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Kdm3aQ6PCM1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Kdm3aQ6PCM1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Kdm3aQ6PCM1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
Kdm3aQ6PCM1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC24.69■■□□□ 1.54
Kdm3aQ6PCM1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Kdm3aQ6PCM1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC24.69■■□□□ 1.54
Kdm3aQ6PCM1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Kdm3aQ6PCM1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Kdm3aQ6PCM1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.69■■□□□ 1.54
Kdm3aQ6PCM1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Kdm3aQ6PCM1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC24.68■■□□□ 1.54
Kdm3aQ6PCM1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms