Protein–RNA interactions for Protein: Q3UZD5

Prdm6, Putative histone-lysine N-methyltransferase PRDM6, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm6Q3UZD5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prdm6Q3UZD5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.05■□□□□ 0.8
Prdm6Q3UZD5 Gm7514-201ENSMUST00000209475 934 ntBASIC20.05■□□□□ 0.8
Prdm6Q3UZD5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Prdm6Q3UZD5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prdm6Q3UZD5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prdm6Q3UZD5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.04■□□□□ 0.8
Prdm6Q3UZD5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prdm6Q3UZD5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Prdm6Q3UZD5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.04■□□□□ 0.8
Prdm6Q3UZD5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.03■□□□□ 0.8
Prdm6Q3UZD5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.03■□□□□ 0.8
Prdm6Q3UZD5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Prdm6Q3UZD5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.03■□□□□ 0.8
Prdm6Q3UZD5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Prdm6Q3UZD5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Prdm6Q3UZD5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Prdm6Q3UZD5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Prdm6Q3UZD5 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.02■□□□□ 0.8
Prdm6Q3UZD5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Prdm6Q3UZD5 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.02■□□□□ 0.8
Prdm6Q3UZD5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prdm6Q3UZD5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prdm6Q3UZD5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Prdm6Q3UZD5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prdm6Q3UZD5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prdm6Q3UZD5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prdm6Q3UZD5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prdm6Q3UZD5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Prdm6Q3UZD5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prdm6Q3UZD5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prdm6Q3UZD5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prdm6Q3UZD5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prdm6Q3UZD5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Prdm6Q3UZD5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.01■□□□□ 0.79
Prdm6Q3UZD5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prdm6Q3UZD5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prdm6Q3UZD5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.01■□□□□ 0.79
Prdm6Q3UZD5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prdm6Q3UZD5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20■□□□□ 0.79
Prdm6Q3UZD5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Prdm6Q3UZD5 Ap3s1-204ENSMUST00000225520 957 ntBASIC20■□□□□ 0.79
Prdm6Q3UZD5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prdm6Q3UZD5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prdm6Q3UZD5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Prdm6Q3UZD5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm6Q3UZD5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm6Q3UZD5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Prdm6Q3UZD5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Prdm6Q3UZD5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm6Q3UZD5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm6Q3UZD5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm6Q3UZD5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.98■□□□□ 0.79
Prdm6Q3UZD5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prdm6Q3UZD5 Gm43530-201ENSMUST00000195920 274 ntBASIC19.98■□□□□ 0.79
Prdm6Q3UZD5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.98■□□□□ 0.79
Prdm6Q3UZD5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prdm6Q3UZD5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Prdm6Q3UZD5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.98■□□□□ 0.79
Prdm6Q3UZD5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prdm6Q3UZD5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.97■□□□□ 0.79
Prdm6Q3UZD5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Prdm6Q3UZD5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.97■□□□□ 0.79
Prdm6Q3UZD5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Prdm6Q3UZD5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prdm6Q3UZD5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.97■□□□□ 0.79
Prdm6Q3UZD5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.96■□□□□ 0.79
Prdm6Q3UZD5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prdm6Q3UZD5 Gm20049-201ENSMUST00000219950 730 ntBASIC19.96■□□□□ 0.79
Prdm6Q3UZD5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prdm6Q3UZD5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.96■□□□□ 0.79
Prdm6Q3UZD5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Prdm6Q3UZD5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prdm6Q3UZD5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Prdm6Q3UZD5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.95■□□□□ 0.78
Prdm6Q3UZD5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Prdm6Q3UZD5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Prdm6Q3UZD5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prdm6Q3UZD5 Reep4-203ENSMUST00000226563 1444 ntBASIC19.94■□□□□ 0.78
Prdm6Q3UZD5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prdm6Q3UZD5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.94■□□□□ 0.78
Prdm6Q3UZD5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.94■□□□□ 0.78
Prdm6Q3UZD5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prdm6Q3UZD5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.94■□□□□ 0.78
Prdm6Q3UZD5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prdm6Q3UZD5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prdm6Q3UZD5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prdm6Q3UZD5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prdm6Q3UZD5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prdm6Q3UZD5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.93■□□□□ 0.78
Prdm6Q3UZD5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.93■□□□□ 0.78
Prdm6Q3UZD5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.93■□□□□ 0.78
Prdm6Q3UZD5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Prdm6Q3UZD5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prdm6Q3UZD5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prdm6Q3UZD5 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prdm6Q3UZD5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.92■□□□□ 0.78
Prdm6Q3UZD5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Prdm6Q3UZD5 Gm5408-201ENSMUST00000197998 747 ntBASIC19.92■□□□□ 0.78
Prdm6Q3UZD5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms