Protein–RNA interactions for Protein: Q30KP3

Defb20, Beta-defensin 20, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb20Q30KP3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Defb20Q30KP3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Defb20Q30KP3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Defb20Q30KP3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Defb20Q30KP3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Defb20Q30KP3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Defb20Q30KP3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Defb20Q30KP3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Defb20Q30KP3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Defb20Q30KP3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Defb20Q30KP3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Defb20Q30KP3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.73■□□□□ 0.43
Defb20Q30KP3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Defb20Q30KP3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Defb20Q30KP3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Defb20Q30KP3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Defb20Q30KP3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Defb20Q30KP3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Defb20Q30KP3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.73■□□□□ 0.43
Defb20Q30KP3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Defb20Q30KP3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Defb20Q30KP3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Defb20Q30KP3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Defb20Q30KP3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Defb20Q30KP3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Defb20Q30KP3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.72■□□□□ 0.43
Defb20Q30KP3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Defb20Q30KP3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.72■□□□□ 0.43
Defb20Q30KP3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Defb20Q30KP3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Defb20Q30KP3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Defb20Q30KP3 Gm43173-201ENSMUST00000202246 593 ntBASIC17.71■□□□□ 0.43
Defb20Q30KP3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Defb20Q30KP3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Defb20Q30KP3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Defb20Q30KP3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Defb20Q30KP3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Defb20Q30KP3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Defb20Q30KP3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Defb20Q30KP3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Defb20Q30KP3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Defb20Q30KP3 Gm26833-201ENSMUST00000180899 440 ntBASIC17.7■□□□□ 0.42
Defb20Q30KP3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.7■□□□□ 0.42
Defb20Q30KP3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.7■□□□□ 0.42
Defb20Q30KP3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Defb20Q30KP3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Defb20Q30KP3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Defb20Q30KP3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Defb20Q30KP3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.69■□□□□ 0.42
Defb20Q30KP3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Defb20Q30KP3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Defb20Q30KP3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Defb20Q30KP3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Defb20Q30KP3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Defb20Q30KP3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.69■□□□□ 0.42
Defb20Q30KP3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Defb20Q30KP3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Defb20Q30KP3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Defb20Q30KP3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Defb20Q30KP3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.69■□□□□ 0.42
Defb20Q30KP3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Defb20Q30KP3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Defb20Q30KP3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Defb20Q30KP3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Defb20Q30KP3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Defb20Q30KP3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Defb20Q30KP3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Defb20Q30KP3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Defb20Q30KP3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Defb20Q30KP3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Defb20Q30KP3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Defb20Q30KP3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Defb20Q30KP3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Defb20Q30KP3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Defb20Q30KP3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Defb20Q30KP3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Defb20Q30KP3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Defb20Q30KP3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Defb20Q30KP3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Defb20Q30KP3 Gm12251-201ENSMUST00000117893 792 ntBASIC17.67■□□□□ 0.42
Defb20Q30KP3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.67■□□□□ 0.42
Defb20Q30KP3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Defb20Q30KP3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Defb20Q30KP3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Defb20Q30KP3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Defb20Q30KP3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Defb20Q30KP3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Defb20Q30KP3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Defb20Q30KP3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Defb20Q30KP3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.66■□□□□ 0.42
Defb20Q30KP3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Defb20Q30KP3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Defb20Q30KP3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Defb20Q30KP3 Gm43060-201ENSMUST00000200621 289 ntBASIC17.66■□□□□ 0.42
Defb20Q30KP3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Defb20Q30KP3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Defb20Q30KP3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Defb20Q30KP3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Defb20Q30KP3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Defb20Q30KP3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 641.6 ms