Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC32.64■■■□□ 2.82
Col17a1Q07563 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC32.64■■■□□ 2.82
Col17a1Q07563 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Col17a1Q07563 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC32.64■■■□□ 2.81
Col17a1Q07563 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Col17a1Q07563 Krtap5-1-202ENSMUST00000188274 742 ntBASIC32.63■■■□□ 2.81
Col17a1Q07563 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC32.63■■■□□ 2.81
Col17a1Q07563 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC32.63■■■□□ 2.81
Col17a1Q07563 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC32.63■■■□□ 2.81
Col17a1Q07563 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Col17a1Q07563 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC32.63■■■□□ 2.81
Col17a1Q07563 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Col17a1Q07563 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC32.62■■■□□ 2.81
Col17a1Q07563 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC32.62■■■□□ 2.81
Col17a1Q07563 Gm43530-201ENSMUST00000195920 274 ntBASIC32.62■■■□□ 2.81
Col17a1Q07563 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC32.62■■■□□ 2.81
Col17a1Q07563 Reep4-203ENSMUST00000226563 1444 ntBASIC32.62■■■□□ 2.81
Col17a1Q07563 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Col17a1Q07563 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC32.62■■■□□ 2.81
Col17a1Q07563 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Col17a1Q07563 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Col17a1Q07563 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Col17a1Q07563 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Col17a1Q07563 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC32.61■■■□□ 2.81
Col17a1Q07563 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Col17a1Q07563 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Col17a1Q07563 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC32.61■■■□□ 2.81
Col17a1Q07563 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Col17a1Q07563 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Col17a1Q07563 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Col17a1Q07563 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC32.6■■■□□ 2.81
Col17a1Q07563 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
Col17a1Q07563 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC32.6■■■□□ 2.81
Col17a1Q07563 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Col17a1Q07563 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Col17a1Q07563 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC32.59■■■□□ 2.81
Col17a1Q07563 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC32.59■■■□□ 2.81
Col17a1Q07563 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Col17a1Q07563 Gm14281-201ENSMUST00000121700 1294 ntBASIC32.58■■■□□ 2.81
Col17a1Q07563 Kdm3b-204ENSMUST00000224715 2032 ntBASIC32.58■■■□□ 2.81
Col17a1Q07563 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
Col17a1Q07563 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
Col17a1Q07563 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Col17a1Q07563 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC32.57■■■□□ 2.8
Col17a1Q07563 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
Col17a1Q07563 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC32.56■■■□□ 2.8
Col17a1Q07563 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Col17a1Q07563 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Col17a1Q07563 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC32.56■■■□□ 2.8
Col17a1Q07563 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Col17a1Q07563 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Col17a1Q07563 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC32.55■■■□□ 2.8
Col17a1Q07563 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC32.54■■■□□ 2.8
Col17a1Q07563 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Col17a1Q07563 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Col17a1Q07563 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Col17a1Q07563 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC32.54■■■□□ 2.8
Col17a1Q07563 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC32.54■■■□□ 2.8
Col17a1Q07563 Gm4430-201ENSMUST00000192413 1943 ntBASIC32.53■■■□□ 2.8
Col17a1Q07563 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
Col17a1Q07563 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
Col17a1Q07563 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
Col17a1Q07563 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Col17a1Q07563 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC32.52■■■□□ 2.8
Col17a1Q07563 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
Col17a1Q07563 Gm44878-201ENSMUST00000205812 1295 ntBASIC32.52■■■□□ 2.8
Col17a1Q07563 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC32.52■■■□□ 2.8
Col17a1Q07563 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Col17a1Q07563 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Col17a1Q07563 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC32.51■■■□□ 2.79
Col17a1Q07563 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.79
Col17a1Q07563 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
Col17a1Q07563 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC32.51■■■□□ 2.79
Col17a1Q07563 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Col17a1Q07563 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC32.51■■■□□ 2.79
Col17a1Q07563 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC32.51■■■□□ 2.79
Col17a1Q07563 AC158990.1-201ENSMUST00000221450 2016 ntBASIC32.5■■■□□ 2.79
Col17a1Q07563 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Col17a1Q07563 Gm5408-201ENSMUST00000197998 747 ntBASIC32.5■■■□□ 2.79
Col17a1Q07563 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC32.5■■■□□ 2.79
Col17a1Q07563 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Col17a1Q07563 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC32.49■■■□□ 2.79
Col17a1Q07563 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Col17a1Q07563 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Col17a1Q07563 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC32.49■■■□□ 2.79
Col17a1Q07563 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Col17a1Q07563 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Col17a1Q07563 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC32.48■■■□□ 2.79
Col17a1Q07563 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Col17a1Q07563 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC32.47■■■□□ 2.79
Col17a1Q07563 Gm11643-201ENSMUST00000119578 864 ntBASIC32.46■■■□□ 2.79
Col17a1Q07563 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Col17a1Q07563 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
Col17a1Q07563 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC32.45■■■□□ 2.79
Col17a1Q07563 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Col17a1Q07563 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Col17a1Q07563 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC32.45■■■□□ 2.78
Col17a1Q07563 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Col17a1Q07563 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
Col17a1Q07563 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms