Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
NclP09405 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NclP09405 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
NclP09405 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
NclP09405 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NclP09405 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
NclP09405 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NclP09405 Gm37415-201ENSMUST00000192265 2054 ntBASIC30.37■■■□□ 2.45
NclP09405 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC30.37■■■□□ 2.45
NclP09405 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
NclP09405 Mir7075-201ENSMUST00000184187 82 ntBASIC30.37■■■□□ 2.45
NclP09405 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NclP09405 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
NclP09405 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NclP09405 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NclP09405 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
NclP09405 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
NclP09405 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NclP09405 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC30.36■■■□□ 2.45
NclP09405 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
NclP09405 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NclP09405 Gm43403-201ENSMUST00000198011 1786 ntBASIC30.36■■■□□ 2.45
NclP09405 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
NclP09405 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
NclP09405 AC166356.1-201ENSMUST00000228236 1426 ntBASIC30.35■■■□□ 2.45
NclP09405 Dmtn-209ENSMUST00000228295 2572 ntBASIC30.35■■■□□ 2.45
NclP09405 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
NclP09405 Gm5576-201ENSMUST00000075809 1236 ntBASIC30.34■■■□□ 2.45
NclP09405 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NclP09405 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NclP09405 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC30.33■■■□□ 2.45
NclP09405 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC30.33■■■□□ 2.45
NclP09405 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NclP09405 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
NclP09405 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
NclP09405 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
NclP09405 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
NclP09405 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NclP09405 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NclP09405 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NclP09405 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC30.31■■■□□ 2.44
NclP09405 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NclP09405 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NclP09405 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
NclP09405 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NclP09405 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC30.31■■■□□ 2.44
NclP09405 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC30.31■■■□□ 2.44
NclP09405 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC30.31■■■□□ 2.44
NclP09405 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
NclP09405 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NclP09405 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NclP09405 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC30.3■■■□□ 2.44
NclP09405 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NclP09405 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NclP09405 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC30.3■■■□□ 2.44
NclP09405 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
NclP09405 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NclP09405 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC30.29■■■□□ 2.44
NclP09405 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
NclP09405 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
NclP09405 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
NclP09405 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
NclP09405 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC30.29■■■□□ 2.44
NclP09405 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
NclP09405 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC30.28■■■□□ 2.44
NclP09405 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC30.28■■■□□ 2.44
NclP09405 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
NclP09405 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
NclP09405 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
NclP09405 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
NclP09405 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC30.27■■■□□ 2.44
NclP09405 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
NclP09405 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
NclP09405 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
NclP09405 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.44
NclP09405 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
NclP09405 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
NclP09405 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
NclP09405 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
NclP09405 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
NclP09405 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
NclP09405 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC30.25■■■□□ 2.43
NclP09405 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
NclP09405 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
NclP09405 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC30.24■■■□□ 2.43
NclP09405 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
NclP09405 Gm8493-201ENSMUST00000196881 489 ntBASIC30.24■■■□□ 2.43
NclP09405 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
NclP09405 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
NclP09405 Gm5913-201ENSMUST00000119397 1399 ntBASIC30.24■■■□□ 2.43
NclP09405 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
NclP09405 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
NclP09405 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC30.23■■■□□ 2.43
NclP09405 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
NclP09405 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
NclP09405 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
NclP09405 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
NclP09405 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NclP09405 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
NclP09405 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms