Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdh9F8VPK8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Pcdh9F8VPK8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh9F8VPK8 Gm13238-201ENSMUST00000117655 780 ntBASIC21■□□□□ 0.95
Pcdh9F8VPK8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh9F8VPK8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh9F8VPK8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh9F8VPK8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh9F8VPK8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh9F8VPK8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh9F8VPK8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pcdh9F8VPK8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh9F8VPK8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh9F8VPK8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh9F8VPK8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh9F8VPK8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh9F8VPK8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh9F8VPK8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh9F8VPK8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh9F8VPK8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh9F8VPK8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh9F8VPK8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh9F8VPK8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcdh9F8VPK8 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.98■□□□□ 0.95
Pcdh9F8VPK8 Gm43566-201ENSMUST00000196851 808 ntBASIC20.98■□□□□ 0.95
Pcdh9F8VPK8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pcdh9F8VPK8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh9F8VPK8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh9F8VPK8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh9F8VPK8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh9F8VPK8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh9F8VPK8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh9F8VPK8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdh9F8VPK8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh9F8VPK8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh9F8VPK8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Pcdh9F8VPK8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Pcdh9F8VPK8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.96■□□□□ 0.95
Pcdh9F8VPK8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdh9F8VPK8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh9F8VPK8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh9F8VPK8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh9F8VPK8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh9F8VPK8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.96■□□□□ 0.95
Pcdh9F8VPK8 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.96■□□□□ 0.95
Pcdh9F8VPK8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh9F8VPK8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh9F8VPK8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh9F8VPK8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Pcdh9F8VPK8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdh9F8VPK8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh9F8VPK8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh9F8VPK8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh9F8VPK8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh9F8VPK8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh9F8VPK8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.95■□□□□ 0.94
Pcdh9F8VPK8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh9F8VPK8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh9F8VPK8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh9F8VPK8 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.95■□□□□ 0.94
Pcdh9F8VPK8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Pcdh9F8VPK8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh9F8VPK8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh9F8VPK8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh9F8VPK8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh9F8VPK8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh9F8VPK8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh9F8VPK8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh9F8VPK8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh9F8VPK8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh9F8VPK8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.93■□□□□ 0.94
Pcdh9F8VPK8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh9F8VPK8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh9F8VPK8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh9F8VPK8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh9F8VPK8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcdh9F8VPK8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh9F8VPK8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh9F8VPK8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh9F8VPK8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh9F8VPK8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.92■□□□□ 0.94
Pcdh9F8VPK8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh9F8VPK8 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.92■□□□□ 0.94
Pcdh9F8VPK8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh9F8VPK8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh9F8VPK8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh9F8VPK8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh9F8VPK8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh9F8VPK8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh9F8VPK8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.92■□□□□ 0.94
Pcdh9F8VPK8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh9F8VPK8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh9F8VPK8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh9F8VPK8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh9F8VPK8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh9F8VPK8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pcdh9F8VPK8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh9F8VPK8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh9F8VPK8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pcdh9F8VPK8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms