Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC10.18□□□□□ -0.78
Rnf213E9Q555 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Gm29994-201ENSMUST00000195495 1193 ntBASIC10.18□□□□□ -0.78
Rnf213E9Q555 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf213E9Q555 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC10.17□□□□□ -0.78
Rnf213E9Q555 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf213E9Q555 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC10.17□□□□□ -0.78
Rnf213E9Q555 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC10.16□□□□□ -0.78
Rnf213E9Q555 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Rnf213E9Q555 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf213E9Q555 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Rnf213E9Q555 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf213E9Q555 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf213E9Q555 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf213E9Q555 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf213E9Q555 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf213E9Q555 Reep4-203ENSMUST00000226563 1444 ntBASIC10.15□□□□□ -0.78
Rnf213E9Q555 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf213E9Q555 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf213E9Q555 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf213E9Q555 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf213E9Q555 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Rnf213E9Q555 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf213E9Q555 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf213E9Q555 Mir5133-201ENSMUST00000174955 77 ntBASIC10.15□□□□□ -0.79
Rnf213E9Q555 Gm7514-201ENSMUST00000209475 934 ntBASIC10.15□□□□□ -0.79
Rnf213E9Q555 Gm44878-201ENSMUST00000205812 1295 ntBASIC10.14□□□□□ -0.79
Rnf213E9Q555 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC10.14□□□□□ -0.79
Rnf213E9Q555 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Rnf213E9Q555 Gm43859-201ENSMUST00000200075 1412 ntBASIC10.14□□□□□ -0.79
Rnf213E9Q555 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Rnf213E9Q555 Gm37856-201ENSMUST00000191634 999 ntBASIC10.14□□□□□ -0.79
Rnf213E9Q555 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Rnf213E9Q555 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC10.14□□□□□ -0.79
Rnf213E9Q555 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rnf213E9Q555 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC10.14□□□□□ -0.79
Rnf213E9Q555 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC10.14□□□□□ -0.79
Rnf213E9Q555 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rnf213E9Q555 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 Ap3s1-204ENSMUST00000225520 957 ntBASIC10.13□□□□□ -0.79
Rnf213E9Q555 AC135637.1-201ENSMUST00000227750 365 ntBASIC10.13□□□□□ -0.79
Rnf213E9Q555 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Rnf213E9Q555 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Gm11421-201ENSMUST00000122124 294 ntBASIC10.11□□□□□ -0.79
Rnf213E9Q555 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Gm13836-201ENSMUST00000121159 501 ntBASIC10.11□□□□□ -0.79
Rnf213E9Q555 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms