Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC10.18□□□□□ -0.78
Rnf213E9Q555 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Gm29994-201ENSMUST00000195495 1193 ntBASIC10.18□□□□□ -0.78
Rnf213E9Q555 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf213E9Q555 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC10.17□□□□□ -0.78
Rnf213E9Q555 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf213E9Q555 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf213E9Q555 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC10.17□□□□□ -0.78
Rnf213E9Q555 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC10.16□□□□□ -0.78
Rnf213E9Q555 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Rnf213E9Q555 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf213E9Q555 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Rnf213E9Q555 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf213E9Q555 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf213E9Q555 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf213E9Q555 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf213E9Q555 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf213E9Q555 Reep4-203ENSMUST00000226563 1444 ntBASIC10.15□□□□□ -0.78
Rnf213E9Q555 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf213E9Q555 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf213E9Q555 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf213E9Q555 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf213E9Q555 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Rnf213E9Q555 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf213E9Q555 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf213E9Q555 Mir5133-201ENSMUST00000174955 77 ntBASIC10.15□□□□□ -0.79
Rnf213E9Q555 Gm7514-201ENSMUST00000209475 934 ntBASIC10.15□□□□□ -0.79
Rnf213E9Q555 Gm44878-201ENSMUST00000205812 1295 ntBASIC10.14□□□□□ -0.79
Rnf213E9Q555 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC10.14□□□□□ -0.79
Rnf213E9Q555 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Rnf213E9Q555 Gm43859-201ENSMUST00000200075 1412 ntBASIC10.14□□□□□ -0.79
Rnf213E9Q555 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Rnf213E9Q555 Gm37856-201ENSMUST00000191634 999 ntBASIC10.14□□□□□ -0.79
Rnf213E9Q555 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Rnf213E9Q555 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC10.14□□□□□ -0.79
Rnf213E9Q555 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rnf213E9Q555 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC10.14□□□□□ -0.79
Rnf213E9Q555 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC10.14□□□□□ -0.79
Rnf213E9Q555 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rnf213E9Q555 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 Ap3s1-204ENSMUST00000225520 957 ntBASIC10.13□□□□□ -0.79
Rnf213E9Q555 AC135637.1-201ENSMUST00000227750 365 ntBASIC10.13□□□□□ -0.79
Rnf213E9Q555 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rnf213E9Q555 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Rnf213E9Q555 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rnf213E9Q555 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Gm11421-201ENSMUST00000122124 294 ntBASIC10.11□□□□□ -0.79
Rnf213E9Q555 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Gm13836-201ENSMUST00000121159 501 ntBASIC10.11□□□□□ -0.79
Rnf213E9Q555 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms