Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Herc1E9PZP8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Herc1E9PZP8 Reep4-203ENSMUST00000226563 1444 ntBASIC11.94□□□□□ -0.5
Herc1E9PZP8 Gm13234-201ENSMUST00000120010 747 ntBASIC11.94□□□□□ -0.5
Herc1E9PZP8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Herc1E9PZP8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC11.93□□□□□ -0.5
Herc1E9PZP8 Gm7514-201ENSMUST00000209475 934 ntBASIC11.93□□□□□ -0.5
Herc1E9PZP8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Herc1E9PZP8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Herc1E9PZP8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.93□□□□□ -0.5
Herc1E9PZP8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Herc1E9PZP8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Herc1E9PZP8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Herc1E9PZP8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Herc1E9PZP8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Herc1E9PZP8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Herc1E9PZP8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Herc1E9PZP8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC11.92□□□□□ -0.5
Herc1E9PZP8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Herc1E9PZP8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC11.92□□□□□ -0.5
Herc1E9PZP8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Herc1E9PZP8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Herc1E9PZP8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Herc1E9PZP8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Herc1E9PZP8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Herc1E9PZP8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Herc1E9PZP8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Herc1E9PZP8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Herc1E9PZP8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Herc1E9PZP8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Herc1E9PZP8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.91□□□□□ -0.5
Herc1E9PZP8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Herc1E9PZP8 Gm10517-202ENSMUST00000192970 758 ntBASIC11.91□□□□□ -0.5
Herc1E9PZP8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Herc1E9PZP8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Herc1E9PZP8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC11.91□□□□□ -0.5
Herc1E9PZP8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Herc1E9PZP8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Herc1E9PZP8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC11.9□□□□□ -0.5
Herc1E9PZP8 Trmt13-210ENSMUST00000198454 880 ntBASIC11.9□□□□□ -0.5
Herc1E9PZP8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Herc1E9PZP8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC11.9□□□□□ -0.5
Herc1E9PZP8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Herc1E9PZP8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Herc1E9PZP8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Herc1E9PZP8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Herc1E9PZP8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC11.9□□□□□ -0.5
Herc1E9PZP8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Herc1E9PZP8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Gm9987-201ENSMUST00000069768 567 ntBASIC11.89□□□□□ -0.51
Herc1E9PZP8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Herc1E9PZP8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Herc1E9PZP8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Herc1E9PZP8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Herc1E9PZP8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.88□□□□□ -0.51
Herc1E9PZP8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.88□□□□□ -0.51
Herc1E9PZP8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Herc1E9PZP8 Gm5867-201ENSMUST00000063197 592 ntBASIC11.88□□□□□ -0.51
Herc1E9PZP8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.88□□□□□ -0.51
Herc1E9PZP8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Herc1E9PZP8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Herc1E9PZP8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC11.87□□□□□ -0.51
Herc1E9PZP8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Herc1E9PZP8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Herc1E9PZP8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11.87□□□□□ -0.51
Herc1E9PZP8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Herc1E9PZP8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC11.87□□□□□ -0.51
Herc1E9PZP8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Herc1E9PZP8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Herc1E9PZP8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Herc1E9PZP8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC11.86□□□□□ -0.51
Herc1E9PZP8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.86□□□□□ -0.51
Herc1E9PZP8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Herc1E9PZP8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Herc1E9PZP8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Herc1E9PZP8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Herc1E9PZP8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Herc1E9PZP8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Herc1E9PZP8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC11.85□□□□□ -0.51
Herc1E9PZP8 Gm11249-201ENSMUST00000117071 859 ntBASIC11.85□□□□□ -0.51
Herc1E9PZP8 Gm6433-201ENSMUST00000118634 875 ntBASIC11.85□□□□□ -0.51
Herc1E9PZP8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Herc1E9PZP8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Herc1E9PZP8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms