Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.39■□□□□ 0.05
Gm5878E9PUB3 Gm43566-201ENSMUST00000196851 808 ntBASIC15.39■□□□□ 0.05
Gm5878E9PUB3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm5878E9PUB3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm5878E9PUB3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Gm5878E9PUB3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm5878E9PUB3 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.39■□□□□ 0.05
Gm5878E9PUB3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm5878E9PUB3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm5878E9PUB3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Gm5878E9PUB3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm5878E9PUB3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm5878E9PUB3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm5878E9PUB3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.38■□□□□ 0.05
Gm5878E9PUB3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Gm5878E9PUB3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm5878E9PUB3 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.38■□□□□ 0.05
Gm5878E9PUB3 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.37■□□□□ 0.05
Gm5878E9PUB3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm5878E9PUB3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm5878E9PUB3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
Gm5878E9PUB3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm5878E9PUB3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.37■□□□□ 0.05
Gm5878E9PUB3 Gm10399-202ENSMUST00000202768 748 ntBASIC15.37■□□□□ 0.05
Gm5878E9PUB3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.37■□□□□ 0.05
Gm5878E9PUB3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.37■□□□□ 0.05
Gm5878E9PUB3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Gm5878E9PUB3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm5878E9PUB3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm5878E9PUB3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm5878E9PUB3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm5878E9PUB3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm5878E9PUB3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm5878E9PUB3 Cap2-205ENSMUST00000225824 1634 ntBASIC15.36■□□□□ 0.05
Gm5878E9PUB3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm5878E9PUB3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm5878E9PUB3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.36■□□□□ 0.05
Gm5878E9PUB3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm5878E9PUB3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm5878E9PUB3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.36■□□□□ 0.05
Gm5878E9PUB3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm5878E9PUB3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm5878E9PUB3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.36■□□□□ 0.05
Gm5878E9PUB3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm5878E9PUB3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm5878E9PUB3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm5878E9PUB3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm5878E9PUB3 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.35■□□□□ 0.05
Gm5878E9PUB3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm5878E9PUB3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm5878E9PUB3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm5878E9PUB3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.35■□□□□ 0.05
Gm5878E9PUB3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.35■□□□□ 0.05
Gm5878E9PUB3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.35■□□□□ 0.05
Gm5878E9PUB3 Gm5921-201ENSMUST00000075898 882 ntBASIC15.35■□□□□ 0.05
Gm5878E9PUB3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm5878E9PUB3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm5878E9PUB3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Gm5878E9PUB3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm5878E9PUB3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Gm5878E9PUB3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm5878E9PUB3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm5878E9PUB3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm5878E9PUB3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm5878E9PUB3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm5878E9PUB3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm5878E9PUB3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Gm5878E9PUB3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm5878E9PUB3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm5878E9PUB3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Gm5878E9PUB3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm5878E9PUB3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm5878E9PUB3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.33■□□□□ 0.04
Gm5878E9PUB3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm5878E9PUB3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.33■□□□□ 0.04
Gm5878E9PUB3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm5878E9PUB3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm5878E9PUB3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.33■□□□□ 0.04
Gm5878E9PUB3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm5878E9PUB3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm5878E9PUB3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm5878E9PUB3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm5878E9PUB3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm5878E9PUB3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm5878E9PUB3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm5878E9PUB3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm5878E9PUB3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm5878E9PUB3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm5878E9PUB3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Gm5878E9PUB3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm5878E9PUB3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm5878E9PUB3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Gm5878E9PUB3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm5878E9PUB3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5878E9PUB3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5878E9PUB3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5878E9PUB3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5878E9PUB3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5878E9PUB3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5878E9PUB3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms