Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 Gm40848-201ENSMUST00000221998 324 ntBASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trav8n-2A0A075B633 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav8n-2A0A075B633 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav8n-2A0A075B633 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.81■□□□□ 0.6
Trav8n-2A0A075B633 Gm27405-201ENSMUST00000184201 112 ntBASIC18.81■□□□□ 0.6
Trav8n-2A0A075B633 Gm42642-201ENSMUST00000200683 355 ntBASIC18.81■□□□□ 0.6
Trav8n-2A0A075B633 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav8n-2A0A075B633 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav8n-2A0A075B633 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav8n-2A0A075B633 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav8n-2A0A075B633 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav8n-2A0A075B633 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trav8n-2A0A075B633 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.8■□□□□ 0.6
Trav8n-2A0A075B633 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.8■□□□□ 0.6
Trav8n-2A0A075B633 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trav8n-2A0A075B633 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav8n-2A0A075B633 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav8n-2A0A075B633 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8n-2A0A075B633 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8n-2A0A075B633 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8n-2A0A075B633 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8n-2A0A075B633 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trav8n-2A0A075B633 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.79■□□□□ 0.6
Trav8n-2A0A075B633 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8n-2A0A075B633 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8n-2A0A075B633 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8n-2A0A075B633 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8n-2A0A075B633 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.79■□□□□ 0.6
Trav8n-2A0A075B633 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8n-2A0A075B633 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8n-2A0A075B633 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8n-2A0A075B633 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.78■□□□□ 0.6
Trav8n-2A0A075B633 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8n-2A0A075B633 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8n-2A0A075B633 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trav8n-2A0A075B633 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.77■□□□□ 0.6
Trav8n-2A0A075B633 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Trav8n-2A0A075B633 Smad6-203ENSMUST00000179458 273 ntBASIC18.77■□□□□ 0.6
Trav8n-2A0A075B633 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.77■□□□□ 0.6
Trav8n-2A0A075B633 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.77■□□□□ 0.6
Trav8n-2A0A075B633 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trav8n-2A0A075B633 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trav8n-2A0A075B633 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav8n-2A0A075B633 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav8n-2A0A075B633 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Trav8n-2A0A075B633 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.76■□□□□ 0.59
Trav8n-2A0A075B633 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8n-2A0A075B633 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Trav8n-2A0A075B633 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8n-2A0A075B633 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.76■□□□□ 0.59
Trav8n-2A0A075B633 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8n-2A0A075B633 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8n-2A0A075B633 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.76■□□□□ 0.59
Trav8n-2A0A075B633 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trav8n-2A0A075B633 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.76■□□□□ 0.59
Trav8n-2A0A075B633 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8n-2A0A075B633 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8n-2A0A075B633 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
Trav8n-2A0A075B633 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
Trav8n-2A0A075B633 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav8n-2A0A075B633 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trav8n-2A0A075B633 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.75■□□□□ 0.59
Trav8n-2A0A075B633 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.75■□□□□ 0.59
Trav8n-2A0A075B633 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.75■□□□□ 0.59
Trav8n-2A0A075B633 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav8n-2A0A075B633 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Trav8n-2A0A075B633 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav8n-2A0A075B633 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav8n-2A0A075B633 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav8n-2A0A075B633 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Trav8n-2A0A075B633 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.74■□□□□ 0.59
Trav8n-2A0A075B633 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trav8n-2A0A075B633 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav8n-2A0A075B633 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trav8n-2A0A075B633 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.74■□□□□ 0.59
Trav8n-2A0A075B633 Gm26571-201ENSMUST00000181399 666 ntBASIC18.74■□□□□ 0.59
Trav8n-2A0A075B633 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav8n-2A0A075B633 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav8n-2A0A075B633 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav8n-2A0A075B633 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms