Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
H2afb1S4R1E0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb1S4R1E0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb1S4R1E0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb1S4R1E0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
H2afb1S4R1E0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb1S4R1E0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
H2afb1S4R1E0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
H2afb1S4R1E0 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.53■□□□□ 0.56
H2afb1S4R1E0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb1S4R1E0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb1S4R1E0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb1S4R1E0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb1S4R1E0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.52■□□□□ 0.56
H2afb1S4R1E0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.52■□□□□ 0.56
H2afb1S4R1E0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb1S4R1E0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb1S4R1E0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb1S4R1E0 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.52■□□□□ 0.55
H2afb1S4R1E0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb1S4R1E0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb1S4R1E0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1S4R1E0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1S4R1E0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1S4R1E0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1S4R1E0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1S4R1E0 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.51■□□□□ 0.55
H2afb1S4R1E0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.51■□□□□ 0.55
H2afb1S4R1E0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
H2afb1S4R1E0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1S4R1E0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1S4R1E0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1S4R1E0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2afb1S4R1E0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.5■□□□□ 0.55
H2afb1S4R1E0 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.49■□□□□ 0.55
H2afb1S4R1E0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1S4R1E0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1S4R1E0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1S4R1E0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1S4R1E0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1S4R1E0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1S4R1E0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.49■□□□□ 0.55
H2afb1S4R1E0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1S4R1E0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1S4R1E0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1S4R1E0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1S4R1E0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
H2afb1S4R1E0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1S4R1E0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1S4R1E0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1S4R1E0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1S4R1E0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1S4R1E0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.48■□□□□ 0.55
H2afb1S4R1E0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1S4R1E0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1S4R1E0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1S4R1E0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1S4R1E0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1S4R1E0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1S4R1E0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1S4R1E0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1S4R1E0 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.47■□□□□ 0.55
H2afb1S4R1E0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1S4R1E0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
H2afb1S4R1E0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1S4R1E0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1S4R1E0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1S4R1E0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1S4R1E0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1S4R1E0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1S4R1E0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb1S4R1E0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb1S4R1E0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb1S4R1E0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.46■□□□□ 0.55
H2afb1S4R1E0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb1S4R1E0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1S4R1E0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1S4R1E0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1S4R1E0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1S4R1E0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1S4R1E0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
H2afb1S4R1E0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1S4R1E0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1S4R1E0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1S4R1E0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.45■□□□□ 0.54
H2afb1S4R1E0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1S4R1E0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
H2afb1S4R1E0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb1S4R1E0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
H2afb1S4R1E0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
H2afb1S4R1E0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb1S4R1E0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
H2afb1S4R1E0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb1S4R1E0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
H2afb1S4R1E0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb1S4R1E0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
H2afb1S4R1E0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb1S4R1E0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb1S4R1E0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.43■□□□□ 0.54
H2afb1S4R1E0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms