Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Q9CR55 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Q9CR55 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q9CR55 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.84■□□□□ 0.61
Q9CR55 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.84■□□□□ 0.61
Q9CR55 Gm30023-201ENSMUST00000197970 889 ntBASIC18.84■□□□□ 0.61
Q9CR55 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Q9CR55 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q9CR55 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Q9CR55 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Q9CR55 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Q9CR55 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Q9CR55 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Q9CR55 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9CR55 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9CR55 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.83■□□□□ 0.6
Q9CR55 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Q9CR55 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9CR55 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9CR55 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Q9CR55 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CR55 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Q9CR55 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CR55 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Q9CR55 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CR55 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CR55 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CR55 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CR55 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CR55 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CR55 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.81■□□□□ 0.6
Q9CR55 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Q9CR55 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CR55 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CR55 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CR55 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.81■□□□□ 0.6
Q9CR55 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CR55 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CR55 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CR55 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CR55 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Q9CR55 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CR55 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CR55 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CR55 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CR55 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Q9CR55 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CR55 Gm22567-201ENSMUST00000175542 342 ntBASIC18.8■□□□□ 0.6
Q9CR55 Mir6538-201ENSMUST00000183713 110 ntBASIC18.8■□□□□ 0.6
Q9CR55 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CR55 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CR55 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CR55 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CR55 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CR55 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CR55 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Q9CR55 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CR55 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CR55 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.79■□□□□ 0.6
Q9CR55 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CR55 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CR55 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CR55 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CR55 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CR55 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CR55 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Q9CR55 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CR55 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CR55 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CR55 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CR55 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Q9CR55 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CR55 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.78■□□□□ 0.6
Q9CR55 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Q9CR55 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CR55 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Q9CR55 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CR55 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CR55 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CR55 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CR55 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CR55 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CR55 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Q9CR55 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Q9CR55 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q9CR55 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q9CR55 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.76■□□□□ 0.59
Q9CR55 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q9CR55 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Q9CR55 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Q9CR55 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Q9CR55 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.76■□□□□ 0.59
Q9CR55 Gm6311-201ENSMUST00000073790 878 ntBASIC18.76■□□□□ 0.59
Q9CR55 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q9CR55 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Q9CR55 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.76■□□□□ 0.59
Q9CR55 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q9CR55 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Q9CR55 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q9CR55 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms