Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdh23Q99PF4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cdh23Q99PF4 Gm18671-201ENSMUST00000214826 683 ntBASIC21.48■■□□□ 1.03
Cdh23Q99PF4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdh23Q99PF4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdh23Q99PF4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.48■■□□□ 1.03
Cdh23Q99PF4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdh23Q99PF4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cdh23Q99PF4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.47■■□□□ 1.03
Cdh23Q99PF4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Cdh23Q99PF4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.47■■□□□ 1.03
Cdh23Q99PF4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Cdh23Q99PF4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cdh23Q99PF4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdh23Q99PF4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.46■■□□□ 1.03
Cdh23Q99PF4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdh23Q99PF4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.46■■□□□ 1.03
Cdh23Q99PF4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Cdh23Q99PF4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
Cdh23Q99PF4 Gm10653-202ENSMUST00000139570 835 ntBASIC21.45■■□□□ 1.02
Cdh23Q99PF4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.45■■□□□ 1.02
Cdh23Q99PF4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cdh23Q99PF4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdh23Q99PF4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cdh23Q99PF4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdh23Q99PF4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.44■■□□□ 1.02
Cdh23Q99PF4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.44■■□□□ 1.02
Cdh23Q99PF4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdh23Q99PF4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cdh23Q99PF4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdh23Q99PF4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.44■■□□□ 1.02
Cdh23Q99PF4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdh23Q99PF4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdh23Q99PF4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.43■■□□□ 1.02
Cdh23Q99PF4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdh23Q99PF4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdh23Q99PF4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.43■■□□□ 1.02
Cdh23Q99PF4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cdh23Q99PF4 Gm10602-201ENSMUST00000098239 609 ntBASIC21.43■■□□□ 1.02
Cdh23Q99PF4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdh23Q99PF4 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.42■■□□□ 1.02
Cdh23Q99PF4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdh23Q99PF4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdh23Q99PF4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Cdh23Q99PF4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Cdh23Q99PF4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdh23Q99PF4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Cdh23Q99PF4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdh23Q99PF4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdh23Q99PF4 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.4■■□□□ 1.02
Cdh23Q99PF4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdh23Q99PF4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Cdh23Q99PF4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cdh23Q99PF4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.4■■□□□ 1.02
Cdh23Q99PF4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdh23Q99PF4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdh23Q99PF4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
Cdh23Q99PF4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdh23Q99PF4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdh23Q99PF4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdh23Q99PF4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdh23Q99PF4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdh23Q99PF4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cdh23Q99PF4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cdh23Q99PF4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.38■■□□□ 1.01
Cdh23Q99PF4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Cdh23Q99PF4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.37■■□□□ 1.01
Cdh23Q99PF4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdh23Q99PF4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Cdh23Q99PF4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdh23Q99PF4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cdh23Q99PF4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.36■■□□□ 1.01
Cdh23Q99PF4 Mir7071-201ENSMUST00000184847 69 ntBASIC21.36■■□□□ 1.01
Cdh23Q99PF4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdh23Q99PF4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.36■■□□□ 1.01
Cdh23Q99PF4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cdh23Q99PF4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Cdh23Q99PF4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cdh23Q99PF4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cdh23Q99PF4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdh23Q99PF4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdh23Q99PF4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Cdh23Q99PF4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh23Q99PF4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Cdh23Q99PF4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Cdh23Q99PF4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.34■■□□□ 1.01
Cdh23Q99PF4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh23Q99PF4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdh23Q99PF4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.33■■□□□ 1.01
Cdh23Q99PF4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdh23Q99PF4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdh23Q99PF4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.33■■□□□ 1.01
Cdh23Q99PF4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cdh23Q99PF4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.33■■□□□ 1
Cdh23Q99PF4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Cdh23Q99PF4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Cdh23Q99PF4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cdh23Q99PF4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.33■■□□□ 1
Cdh23Q99PF4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cdh23Q99PF4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 135.1 ms