Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cnot3Q8K0V4 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.25■□□□□ 0.67
Cnot3Q8K0V4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cnot3Q8K0V4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cnot3Q8K0V4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cnot3Q8K0V4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnot3Q8K0V4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnot3Q8K0V4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnot3Q8K0V4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnot3Q8K0V4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Cnot3Q8K0V4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnot3Q8K0V4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnot3Q8K0V4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnot3Q8K0V4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnot3Q8K0V4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnot3Q8K0V4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cnot3Q8K0V4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cnot3Q8K0V4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cnot3Q8K0V4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.23■□□□□ 0.67
Cnot3Q8K0V4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cnot3Q8K0V4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.23■□□□□ 0.67
Cnot3Q8K0V4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cnot3Q8K0V4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cnot3Q8K0V4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.23■□□□□ 0.67
Cnot3Q8K0V4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cnot3Q8K0V4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cnot3Q8K0V4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnot3Q8K0V4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnot3Q8K0V4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cnot3Q8K0V4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnot3Q8K0V4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnot3Q8K0V4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cnot3Q8K0V4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cnot3Q8K0V4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cnot3Q8K0V4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnot3Q8K0V4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cnot3Q8K0V4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot3Q8K0V4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot3Q8K0V4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot3Q8K0V4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cnot3Q8K0V4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot3Q8K0V4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot3Q8K0V4 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.21■□□□□ 0.67
Cnot3Q8K0V4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot3Q8K0V4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot3Q8K0V4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cnot3Q8K0V4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cnot3Q8K0V4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Cnot3Q8K0V4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnot3Q8K0V4 Gm11687-201ENSMUST00000118911 886 ntBASIC19.2■□□□□ 0.66
Cnot3Q8K0V4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnot3Q8K0V4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnot3Q8K0V4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnot3Q8K0V4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnot3Q8K0V4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnot3Q8K0V4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cnot3Q8K0V4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnot3Q8K0V4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cnot3Q8K0V4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnot3Q8K0V4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnot3Q8K0V4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnot3Q8K0V4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.19■□□□□ 0.66
Cnot3Q8K0V4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnot3Q8K0V4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnot3Q8K0V4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnot3Q8K0V4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnot3Q8K0V4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnot3Q8K0V4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.18■□□□□ 0.66
Cnot3Q8K0V4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnot3Q8K0V4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnot3Q8K0V4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnot3Q8K0V4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnot3Q8K0V4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Cnot3Q8K0V4 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.18■□□□□ 0.66
Cnot3Q8K0V4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Cnot3Q8K0V4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cnot3Q8K0V4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cnot3Q8K0V4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cnot3Q8K0V4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cnot3Q8K0V4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.17■□□□□ 0.66
Cnot3Q8K0V4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.17■□□□□ 0.66
Cnot3Q8K0V4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnot3Q8K0V4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnot3Q8K0V4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnot3Q8K0V4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnot3Q8K0V4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnot3Q8K0V4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnot3Q8K0V4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnot3Q8K0V4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnot3Q8K0V4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.15■□□□□ 0.66
Cnot3Q8K0V4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnot3Q8K0V4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cnot3Q8K0V4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnot3Q8K0V4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.15■□□□□ 0.66
Cnot3Q8K0V4 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.15■□□□□ 0.66
Cnot3Q8K0V4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnot3Q8K0V4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnot3Q8K0V4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnot3Q8K0V4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cnot3Q8K0V4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms