Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist3h2bbQ8CGP0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist3h2bbQ8CGP0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist3h2bbQ8CGP0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hist3h2bbQ8CGP0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist3h2bbQ8CGP0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist3h2bbQ8CGP0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist3h2bbQ8CGP0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Hist3h2bbQ8CGP0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hist3h2bbQ8CGP0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist3h2bbQ8CGP0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist3h2bbQ8CGP0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist3h2bbQ8CGP0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist3h2bbQ8CGP0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist3h2bbQ8CGP0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hist3h2bbQ8CGP0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist3h2bbQ8CGP0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hist3h2bbQ8CGP0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC15.68■□□□□ 0.1
Hist3h2bbQ8CGP0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.68■□□□□ 0.1
Hist3h2bbQ8CGP0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
Hist3h2bbQ8CGP0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist3h2bbQ8CGP0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hist3h2bbQ8CGP0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist3h2bbQ8CGP0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist3h2bbQ8CGP0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist3h2bbQ8CGP0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.68■□□□□ 0.1
Hist3h2bbQ8CGP0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist3h2bbQ8CGP0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist3h2bbQ8CGP0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist3h2bbQ8CGP0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist3h2bbQ8CGP0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hist3h2bbQ8CGP0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist3h2bbQ8CGP0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist3h2bbQ8CGP0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.67■□□□□ 0.1
Hist3h2bbQ8CGP0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist3h2bbQ8CGP0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Hist3h2bbQ8CGP0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist3h2bbQ8CGP0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist3h2bbQ8CGP0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hist3h2bbQ8CGP0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist3h2bbQ8CGP0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist3h2bbQ8CGP0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist3h2bbQ8CGP0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Hist3h2bbQ8CGP0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist3h2bbQ8CGP0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist3h2bbQ8CGP0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hist3h2bbQ8CGP0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hist3h2bbQ8CGP0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Hist3h2bbQ8CGP0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hist3h2bbQ8CGP0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.66■□□□□ 0.1
Hist3h2bbQ8CGP0 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.66■□□□□ 0.1
Hist3h2bbQ8CGP0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist3h2bbQ8CGP0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist3h2bbQ8CGP0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hist3h2bbQ8CGP0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist3h2bbQ8CGP0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist3h2bbQ8CGP0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist3h2bbQ8CGP0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist3h2bbQ8CGP0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist3h2bbQ8CGP0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist3h2bbQ8CGP0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist3h2bbQ8CGP0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist3h2bbQ8CGP0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hist3h2bbQ8CGP0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist3h2bbQ8CGP0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Hist3h2bbQ8CGP0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hist3h2bbQ8CGP0 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.64■□□□□ 0.09
Hist3h2bbQ8CGP0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Hist3h2bbQ8CGP0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hist3h2bbQ8CGP0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hist3h2bbQ8CGP0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hist3h2bbQ8CGP0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.64■□□□□ 0.09
Hist3h2bbQ8CGP0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Hist3h2bbQ8CGP0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hist3h2bbQ8CGP0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hist3h2bbQ8CGP0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hist3h2bbQ8CGP0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Hist3h2bbQ8CGP0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.63■□□□□ 0.09
Hist3h2bbQ8CGP0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hist3h2bbQ8CGP0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.63■□□□□ 0.09
Hist3h2bbQ8CGP0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hist3h2bbQ8CGP0 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.63■□□□□ 0.09
Hist3h2bbQ8CGP0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Hist3h2bbQ8CGP0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hist3h2bbQ8CGP0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hist3h2bbQ8CGP0 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.62■□□□□ 0.09
Hist3h2bbQ8CGP0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hist3h2bbQ8CGP0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hist3h2bbQ8CGP0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hist3h2bbQ8CGP0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hist3h2bbQ8CGP0 Gm27322-201ENSMUST00000184007 104 ntBASIC15.62■□□□□ 0.09
Hist3h2bbQ8CGP0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.62■□□□□ 0.09
Hist3h2bbQ8CGP0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hist3h2bbQ8CGP0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hist3h2bbQ8CGP0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hist3h2bbQ8CGP0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hist3h2bbQ8CGP0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hist3h2bbQ8CGP0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hist3h2bbQ8CGP0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hist3h2bbQ8CGP0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms