Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fam228aQ8CDW1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.55■■□□□ 1.04
Fam228aQ8CDW1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fam228aQ8CDW1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fam228aQ8CDW1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fam228aQ8CDW1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Fam228aQ8CDW1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fam228aQ8CDW1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.55■■□□□ 1.04
Fam228aQ8CDW1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Fam228aQ8CDW1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.54■■□□□ 1.04
Fam228aQ8CDW1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.54■■□□□ 1.04
Fam228aQ8CDW1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Fam228aQ8CDW1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fam228aQ8CDW1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fam228aQ8CDW1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fam228aQ8CDW1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fam228aQ8CDW1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fam228aQ8CDW1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fam228aQ8CDW1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Fam228aQ8CDW1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fam228aQ8CDW1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Fam228aQ8CDW1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Fam228aQ8CDW1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Fam228aQ8CDW1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Fam228aQ8CDW1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Fam228aQ8CDW1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Fam228aQ8CDW1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Fam228aQ8CDW1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Fam228aQ8CDW1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Fam228aQ8CDW1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Fam228aQ8CDW1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.53■■□□□ 1.04
Fam228aQ8CDW1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Fam228aQ8CDW1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Fam228aQ8CDW1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Fam228aQ8CDW1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.52■■□□□ 1.04
Fam228aQ8CDW1 Gm14523-201ENSMUST00000117260 558 ntBASIC21.52■■□□□ 1.04
Fam228aQ8CDW1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Fam228aQ8CDW1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Fam228aQ8CDW1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.52■■□□□ 1.03
Fam228aQ8CDW1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Fam228aQ8CDW1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Fam228aQ8CDW1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Fam228aQ8CDW1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Fam228aQ8CDW1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Fam228aQ8CDW1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Fam228aQ8CDW1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Fam228aQ8CDW1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Fam228aQ8CDW1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Fam228aQ8CDW1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Fam228aQ8CDW1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Fam228aQ8CDW1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.5■■□□□ 1.03
Fam228aQ8CDW1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Fam228aQ8CDW1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Fam228aQ8CDW1 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.5■■□□□ 1.03
Fam228aQ8CDW1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Fam228aQ8CDW1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Fam228aQ8CDW1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.49■■□□□ 1.03
Fam228aQ8CDW1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Fam228aQ8CDW1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Fam228aQ8CDW1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.49■■□□□ 1.03
Fam228aQ8CDW1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Fam228aQ8CDW1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Fam228aQ8CDW1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.48■■□□□ 1.03
Fam228aQ8CDW1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Fam228aQ8CDW1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Fam228aQ8CDW1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Fam228aQ8CDW1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Fam228aQ8CDW1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Fam228aQ8CDW1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fam228aQ8CDW1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fam228aQ8CDW1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Fam228aQ8CDW1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fam228aQ8CDW1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Fam228aQ8CDW1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.47■■□□□ 1.03
Fam228aQ8CDW1 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.47■■□□□ 1.03
Fam228aQ8CDW1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fam228aQ8CDW1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Fam228aQ8CDW1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fam228aQ8CDW1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Fam228aQ8CDW1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Fam228aQ8CDW1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.46■■□□□ 1.03
Fam228aQ8CDW1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Fam228aQ8CDW1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Fam228aQ8CDW1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Fam228aQ8CDW1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.46■■□□□ 1.03
Fam228aQ8CDW1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam228aQ8CDW1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Fam228aQ8CDW1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam228aQ8CDW1 Gm7332-201ENSMUST00000118351 454 ntBASIC21.45■■□□□ 1.02
Fam228aQ8CDW1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam228aQ8CDW1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam228aQ8CDW1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam228aQ8CDW1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Fam228aQ8CDW1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam228aQ8CDW1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.44■■□□□ 1.02
Fam228aQ8CDW1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam228aQ8CDW1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam228aQ8CDW1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Fam228aQ8CDW1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Fam228aQ8CDW1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms