Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3rf2Q8BZT2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3rf2Q8BZT2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Sh3rf2Q8BZT2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3rf2Q8BZT2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.91■□□□□ 0.94
Sh3rf2Q8BZT2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Sh3rf2Q8BZT2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.91■□□□□ 0.94
Sh3rf2Q8BZT2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3rf2Q8BZT2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.91■□□□□ 0.94
Sh3rf2Q8BZT2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3rf2Q8BZT2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3rf2Q8BZT2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Sh3rf2Q8BZT2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3rf2Q8BZT2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3rf2Q8BZT2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3rf2Q8BZT2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3rf2Q8BZT2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3rf2Q8BZT2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3rf2Q8BZT2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.9■□□□□ 0.94
Sh3rf2Q8BZT2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Sh3rf2Q8BZT2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3rf2Q8BZT2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Sh3rf2Q8BZT2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Sh3rf2Q8BZT2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3rf2Q8BZT2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.9■□□□□ 0.94
Sh3rf2Q8BZT2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.9■□□□□ 0.94
Sh3rf2Q8BZT2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sh3rf2Q8BZT2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3rf2Q8BZT2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3rf2Q8BZT2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3rf2Q8BZT2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Sh3rf2Q8BZT2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3rf2Q8BZT2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3rf2Q8BZT2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Sh3rf2Q8BZT2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3rf2Q8BZT2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3rf2Q8BZT2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
Sh3rf2Q8BZT2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Sh3rf2Q8BZT2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3rf2Q8BZT2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3rf2Q8BZT2 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.88■□□□□ 0.93
Sh3rf2Q8BZT2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3rf2Q8BZT2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.88■□□□□ 0.93
Sh3rf2Q8BZT2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3rf2Q8BZT2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3rf2Q8BZT2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3rf2Q8BZT2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3rf2Q8BZT2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3rf2Q8BZT2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3rf2Q8BZT2 Gm6139-201ENSMUST00000079261 882 ntBASIC20.87■□□□□ 0.93
Sh3rf2Q8BZT2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3rf2Q8BZT2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.87■□□□□ 0.93
Sh3rf2Q8BZT2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.87■□□□□ 0.93
Sh3rf2Q8BZT2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3rf2Q8BZT2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3rf2Q8BZT2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.86■□□□□ 0.93
Sh3rf2Q8BZT2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.86■□□□□ 0.93
Sh3rf2Q8BZT2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Sh3rf2Q8BZT2 Mir7075-201ENSMUST00000184187 82 ntBASIC20.86■□□□□ 0.93
Sh3rf2Q8BZT2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3rf2Q8BZT2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3rf2Q8BZT2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3rf2Q8BZT2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3rf2Q8BZT2 Gm43530-201ENSMUST00000195920 274 ntBASIC20.85■□□□□ 0.93
Sh3rf2Q8BZT2 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.85■□□□□ 0.93
Sh3rf2Q8BZT2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3rf2Q8BZT2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Sh3rf2Q8BZT2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3rf2Q8BZT2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3rf2Q8BZT2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3rf2Q8BZT2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3rf2Q8BZT2 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.83■□□□□ 0.93
Sh3rf2Q8BZT2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3rf2Q8BZT2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3rf2Q8BZT2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sh3rf2Q8BZT2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sh3rf2Q8BZT2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3rf2Q8BZT2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3rf2Q8BZT2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3rf2Q8BZT2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Sh3rf2Q8BZT2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3rf2Q8BZT2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.82■□□□□ 0.92
Sh3rf2Q8BZT2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3rf2Q8BZT2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3rf2Q8BZT2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Sh3rf2Q8BZT2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.82■□□□□ 0.92
Sh3rf2Q8BZT2 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.82■□□□□ 0.92
Sh3rf2Q8BZT2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3rf2Q8BZT2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3rf2Q8BZT2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3rf2Q8BZT2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.81■□□□□ 0.92
Sh3rf2Q8BZT2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3rf2Q8BZT2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Sh3rf2Q8BZT2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3rf2Q8BZT2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.81■□□□□ 0.92
Sh3rf2Q8BZT2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.81■□□□□ 0.92
Sh3rf2Q8BZT2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.81■□□□□ 0.92
Sh3rf2Q8BZT2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3rf2Q8BZT2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3rf2Q8BZT2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms