Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp25Q3U435 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
Mmp25Q3U435 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp25Q3U435 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp25Q3U435 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Mmp25Q3U435 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp25Q3U435 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp25Q3U435 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.37■□□□□ 0.69
Mmp25Q3U435 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp25Q3U435 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp25Q3U435 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp25Q3U435 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp25Q3U435 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp25Q3U435 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp25Q3U435 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.37■□□□□ 0.69
Mmp25Q3U435 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp25Q3U435 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp25Q3U435 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp25Q3U435 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp25Q3U435 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp25Q3U435 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp25Q3U435 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp25Q3U435 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp25Q3U435 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp25Q3U435 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp25Q3U435 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
Mmp25Q3U435 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp25Q3U435 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.35■□□□□ 0.69
Mmp25Q3U435 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp25Q3U435 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp25Q3U435 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp25Q3U435 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.35■□□□□ 0.69
Mmp25Q3U435 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp25Q3U435 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp25Q3U435 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp25Q3U435 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp25Q3U435 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Mmp25Q3U435 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.34■□□□□ 0.69
Mmp25Q3U435 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Mmp25Q3U435 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.33■□□□□ 0.69
Mmp25Q3U435 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp25Q3U435 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Mmp25Q3U435 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp25Q3U435 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp25Q3U435 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp25Q3U435 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.33■□□□□ 0.68
Mmp25Q3U435 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.33■□□□□ 0.68
Mmp25Q3U435 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.33■□□□□ 0.68
Mmp25Q3U435 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp25Q3U435 Gm9847-201ENSMUST00000052528 599 ntBASIC19.33■□□□□ 0.68
Mmp25Q3U435 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp25Q3U435 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp25Q3U435 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp25Q3U435 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp25Q3U435 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp25Q3U435 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp25Q3U435 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp25Q3U435 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp25Q3U435 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.32■□□□□ 0.68
Mmp25Q3U435 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Mmp25Q3U435 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Mmp25Q3U435 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp25Q3U435 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Mmp25Q3U435 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp25Q3U435 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp25Q3U435 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp25Q3U435 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp25Q3U435 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp25Q3U435 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.31■□□□□ 0.68
Mmp25Q3U435 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp25Q3U435 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp25Q3U435 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.31■□□□□ 0.68
Mmp25Q3U435 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.31■□□□□ 0.68
Mmp25Q3U435 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.31■□□□□ 0.68
Mmp25Q3U435 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp25Q3U435 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp25Q3U435 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp25Q3U435 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp25Q3U435 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Mmp25Q3U435 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp25Q3U435 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp25Q3U435 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp25Q3U435 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp25Q3U435 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp25Q3U435 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp25Q3U435 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.3■□□□□ 0.68
Mmp25Q3U435 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp25Q3U435 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp25Q3U435 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp25Q3U435 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Mmp25Q3U435 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp25Q3U435 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.29■□□□□ 0.68
Mmp25Q3U435 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp25Q3U435 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.29■□□□□ 0.68
Mmp25Q3U435 Golgb1-201ENSMUST00000023534 498 ntBASIC19.29■□□□□ 0.68
Mmp25Q3U435 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Mmp25Q3U435 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp25Q3U435 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp25Q3U435 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp25Q3U435 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms