Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx3-2P97503 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx3-2P97503 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx3-2P97503 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx3-2P97503 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx3-2P97503 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.34■□□□□ 0.69
Nkx3-2P97503 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx3-2P97503 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Nkx3-2P97503 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nkx3-2P97503 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.34■□□□□ 0.69
Nkx3-2P97503 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx3-2P97503 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Nkx3-2P97503 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nkx3-2P97503 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx3-2P97503 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Nkx3-2P97503 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx3-2P97503 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Nkx3-2P97503 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx3-2P97503 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx3-2P97503 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Nkx3-2P97503 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Nkx3-2P97503 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx3-2P97503 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx3-2P97503 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nkx3-2P97503 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx3-2P97503 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx3-2P97503 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.32■□□□□ 0.68
Nkx3-2P97503 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx3-2P97503 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx3-2P97503 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx3-2P97503 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx3-2P97503 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx3-2P97503 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx3-2P97503 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx3-2P97503 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx3-2P97503 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nkx3-2P97503 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.31■□□□□ 0.68
Nkx3-2P97503 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.31■□□□□ 0.68
Nkx3-2P97503 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx3-2P97503 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx3-2P97503 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nkx3-2P97503 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.3■□□□□ 0.68
Nkx3-2P97503 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Nkx3-2P97503 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx3-2P97503 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.3■□□□□ 0.68
Nkx3-2P97503 Gm12821-201ENSMUST00000120022 600 ntBASIC19.3■□□□□ 0.68
Nkx3-2P97503 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx3-2P97503 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Nkx3-2P97503 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx3-2P97503 Gm9870-201ENSMUST00000063874 645 ntBASIC19.3■□□□□ 0.68
Nkx3-2P97503 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.3■□□□□ 0.68
Nkx3-2P97503 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx3-2P97503 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nkx3-2P97503 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx3-2P97503 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx3-2P97503 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nkx3-2P97503 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nkx3-2P97503 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx3-2P97503 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx3-2P97503 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx3-2P97503 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.29■□□□□ 0.68
Nkx3-2P97503 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx3-2P97503 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx3-2P97503 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx3-2P97503 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx3-2P97503 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nkx3-2P97503 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx3-2P97503 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx3-2P97503 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx3-2P97503 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx3-2P97503 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx3-2P97503 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.27■□□□□ 0.68
Nkx3-2P97503 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.27■□□□□ 0.68
Nkx3-2P97503 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.27■□□□□ 0.68
Nkx3-2P97503 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx3-2P97503 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx3-2P97503 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx3-2P97503 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx3-2P97503 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.26■□□□□ 0.67
Nkx3-2P97503 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nkx3-2P97503 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx3-2P97503 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx3-2P97503 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx3-2P97503 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx3-2P97503 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx3-2P97503 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.25■□□□□ 0.67
Nkx3-2P97503 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx3-2P97503 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx3-2P97503 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx3-2P97503 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.25■□□□□ 0.67
Nkx3-2P97503 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx3-2P97503 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx3-2P97503 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.25■□□□□ 0.67
Nkx3-2P97503 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx3-2P97503 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.25■□□□□ 0.67
Nkx3-2P97503 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.25■□□□□ 0.67
Nkx3-2P97503 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx3-2P97503 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx3-2P97503 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx3-2P97503 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms