Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.2■□□□□ 0.34
CfdP03953 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CfdP03953 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CfdP03953 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.2■□□□□ 0.34
CfdP03953 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CfdP03953 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CfdP03953 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CfdP03953 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CfdP03953 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CfdP03953 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.19■□□□□ 0.34
CfdP03953 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.19■□□□□ 0.34
CfdP03953 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CfdP03953 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CfdP03953 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CfdP03953 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.19■□□□□ 0.34
CfdP03953 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CfdP03953 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CfdP03953 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CfdP03953 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CfdP03953 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CfdP03953 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CfdP03953 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CfdP03953 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CfdP03953 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CfdP03953 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.17■□□□□ 0.34
CfdP03953 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CfdP03953 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CfdP03953 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CfdP03953 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.17■□□□□ 0.34
CfdP03953 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.17■□□□□ 0.34
CfdP03953 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.17■□□□□ 0.34
CfdP03953 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CfdP03953 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CfdP03953 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.17■□□□□ 0.34
CfdP03953 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
CfdP03953 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CfdP03953 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CfdP03953 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CfdP03953 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CfdP03953 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CfdP03953 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CfdP03953 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CfdP03953 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CfdP03953 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.16■□□□□ 0.34
CfdP03953 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CfdP03953 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CfdP03953 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.16■□□□□ 0.34
CfdP03953 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CfdP03953 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CfdP03953 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CfdP03953 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CfdP03953 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CfdP03953 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CfdP03953 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CfdP03953 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CfdP03953 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CfdP03953 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.15■□□□□ 0.34
CfdP03953 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CfdP03953 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CfdP03953 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CfdP03953 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CfdP03953 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CfdP03953 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CfdP03953 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CfdP03953 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CfdP03953 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.14■□□□□ 0.33
CfdP03953 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CfdP03953 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CfdP03953 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CfdP03953 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CfdP03953 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CfdP03953 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CfdP03953 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CfdP03953 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.13■□□□□ 0.33
CfdP03953 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.13■□□□□ 0.33
CfdP03953 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CfdP03953 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CfdP03953 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CfdP03953 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CfdP03953 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.13■□□□□ 0.33
CfdP03953 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CfdP03953 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CfdP03953 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
CfdP03953 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CfdP03953 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.12■□□□□ 0.33
CfdP03953 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CfdP03953 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CfdP03953 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CfdP03953 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.12■□□□□ 0.33
CfdP03953 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CfdP03953 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.12■□□□□ 0.33
CfdP03953 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CfdP03953 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CfdP03953 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CfdP03953 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CfdP03953 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.11■□□□□ 0.33
CfdP03953 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfdP03953 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfdP03953 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CfdP03953 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms