Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn1O88551 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn1O88551 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn1O88551 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn1O88551 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.53■□□□□ 0.4
Cldn1O88551 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cldn1O88551 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cldn1O88551 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn1O88551 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn1O88551 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn1O88551 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn1O88551 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.52■□□□□ 0.4
Cldn1O88551 Gm26571-201ENSMUST00000181399 666 ntBASIC17.52■□□□□ 0.4
Cldn1O88551 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.52■□□□□ 0.4
Cldn1O88551 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.52■□□□□ 0.4
Cldn1O88551 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.52■□□□□ 0.4
Cldn1O88551 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn1O88551 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn1O88551 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Cldn1O88551 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn1O88551 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn1O88551 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn1O88551 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn1O88551 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn1O88551 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn1O88551 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.51■□□□□ 0.39
Cldn1O88551 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cldn1O88551 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn1O88551 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn1O88551 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn1O88551 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.51■□□□□ 0.39
Cldn1O88551 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn1O88551 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.51■□□□□ 0.39
Cldn1O88551 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn1O88551 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cldn1O88551 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn1O88551 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cldn1O88551 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn1O88551 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn1O88551 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.5■□□□□ 0.39
Cldn1O88551 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.5■□□□□ 0.39
Cldn1O88551 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.5■□□□□ 0.39
Cldn1O88551 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.5■□□□□ 0.39
Cldn1O88551 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn1O88551 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn1O88551 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn1O88551 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
Cldn1O88551 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.49■□□□□ 0.39
Cldn1O88551 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Cldn1O88551 Gm43173-201ENSMUST00000202246 593 ntBASIC17.49■□□□□ 0.39
Cldn1O88551 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cldn1O88551 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cldn1O88551 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cldn1O88551 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn1O88551 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn1O88551 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cldn1O88551 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn1O88551 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn1O88551 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn1O88551 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn1O88551 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cldn1O88551 Gm42569-201ENSMUST00000200539 472 ntBASIC17.48■□□□□ 0.39
Cldn1O88551 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.48■□□□□ 0.39
Cldn1O88551 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cldn1O88551 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cldn1O88551 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cldn1O88551 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.48■□□□□ 0.39
Cldn1O88551 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn1O88551 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cldn1O88551 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn1O88551 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn1O88551 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn1O88551 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn1O88551 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cldn1O88551 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn1O88551 Gm27405-201ENSMUST00000184201 112 ntBASIC17.47■□□□□ 0.39
Cldn1O88551 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn1O88551 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cldn1O88551 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn1O88551 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn1O88551 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn1O88551 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn1O88551 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Cldn1O88551 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cldn1O88551 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Cldn1O88551 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn1O88551 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn1O88551 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.46■□□□□ 0.39
Cldn1O88551 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn1O88551 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn1O88551 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.46■□□□□ 0.39
Cldn1O88551 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn1O88551 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.46■□□□□ 0.39
Cldn1O88551 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn1O88551 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cldn1O88551 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn1O88551 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cldn1O88551 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.45■□□□□ 0.38
Cldn1O88551 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.45■□□□□ 0.38
Cldn1O88551 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 119.1 ms