Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vamp8O70404 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vamp8O70404 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vamp8O70404 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vamp8O70404 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
Vamp8O70404 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vamp8O70404 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vamp8O70404 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Vamp8O70404 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Vamp8O70404 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Vamp8O70404 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Vamp8O70404 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vamp8O70404 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vamp8O70404 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vamp8O70404 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vamp8O70404 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vamp8O70404 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vamp8O70404 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vamp8O70404 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vamp8O70404 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vamp8O70404 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vamp8O70404 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vamp8O70404 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC14.47□□□□□ -0.09
Vamp8O70404 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Vamp8O70404 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vamp8O70404 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vamp8O70404 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Vamp8O70404 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Vamp8O70404 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vamp8O70404 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.47□□□□□ -0.09
Vamp8O70404 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vamp8O70404 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
Vamp8O70404 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vamp8O70404 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vamp8O70404 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vamp8O70404 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vamp8O70404 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Vamp8O70404 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vamp8O70404 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Vamp8O70404 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Vamp8O70404 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vamp8O70404 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp8O70404 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp8O70404 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp8O70404 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp8O70404 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vamp8O70404 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC14.45□□□□□ -0.1
Vamp8O70404 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Vamp8O70404 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp8O70404 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp8O70404 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp8O70404 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp8O70404 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp8O70404 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp8O70404 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp8O70404 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp8O70404 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vamp8O70404 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vamp8O70404 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Gm16148-201ENSMUST00000119653 893 ntBASIC14.44□□□□□ -0.1
Vamp8O70404 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vamp8O70404 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vamp8O70404 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vamp8O70404 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vamp8O70404 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp8O70404 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp8O70404 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp8O70404 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp8O70404 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp8O70404 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp8O70404 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp8O70404 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vamp8O70404 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp8O70404 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp8O70404 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp8O70404 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp8O70404 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp8O70404 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp8O70404 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp8O70404 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vamp8O70404 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp8O70404 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vamp8O70404 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 180.7 ms