Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atn1O35126 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Atn1O35126 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atn1O35126 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atn1O35126 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Atn1O35126 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atn1O35126 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Atn1O35126 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atn1O35126 Cap2-205ENSMUST00000225824 1634 ntBASIC20.04■□□□□ 0.8
Atn1O35126 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atn1O35126 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atn1O35126 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atn1O35126 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atn1O35126 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Atn1O35126 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atn1O35126 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.03■□□□□ 0.8
Atn1O35126 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.03■□□□□ 0.8
Atn1O35126 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atn1O35126 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atn1O35126 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atn1O35126 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atn1O35126 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atn1O35126 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atn1O35126 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atn1O35126 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atn1O35126 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.02■□□□□ 0.8
Atn1O35126 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atn1O35126 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Atn1O35126 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atn1O35126 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Atn1O35126 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atn1O35126 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Atn1O35126 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Atn1O35126 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atn1O35126 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.01■□□□□ 0.79
Atn1O35126 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atn1O35126 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Atn1O35126 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atn1O35126 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Atn1O35126 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atn1O35126 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.01■□□□□ 0.79
Atn1O35126 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atn1O35126 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atn1O35126 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Atn1O35126 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atn1O35126 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atn1O35126 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20■□□□□ 0.79
Atn1O35126 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atn1O35126 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20■□□□□ 0.79
Atn1O35126 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atn1O35126 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atn1O35126 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atn1O35126 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atn1O35126 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atn1O35126 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atn1O35126 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atn1O35126 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atn1O35126 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atn1O35126 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atn1O35126 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atn1O35126 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atn1O35126 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atn1O35126 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atn1O35126 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atn1O35126 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atn1O35126 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.98■□□□□ 0.79
Atn1O35126 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Atn1O35126 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atn1O35126 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atn1O35126 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.98■□□□□ 0.79
Atn1O35126 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Atn1O35126 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atn1O35126 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atn1O35126 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.98■□□□□ 0.79
Atn1O35126 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Atn1O35126 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atn1O35126 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Atn1O35126 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atn1O35126 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Atn1O35126 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atn1O35126 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atn1O35126 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Atn1O35126 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atn1O35126 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Atn1O35126 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Atn1O35126 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atn1O35126 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.97■□□□□ 0.79
Atn1O35126 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.97■□□□□ 0.79
Atn1O35126 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.97■□□□□ 0.79
Atn1O35126 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atn1O35126 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atn1O35126 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atn1O35126 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.97■□□□□ 0.79
Atn1O35126 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.97■□□□□ 0.79
Atn1O35126 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atn1O35126 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Atn1O35126 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.96■□□□□ 0.79
Atn1O35126 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Atn1O35126 Gm13238-201ENSMUST00000117655 780 ntBASIC19.96■□□□□ 0.79
Atn1O35126 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms