Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.02□□□□□ -0.49
Herc1E9PZP8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Herc1E9PZP8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Herc1E9PZP8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.02□□□□□ -0.49
Herc1E9PZP8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Herc1E9PZP8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Herc1E9PZP8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Herc1E9PZP8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Herc1E9PZP8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Herc1E9PZP8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Herc1E9PZP8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Herc1E9PZP8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.01□□□□□ -0.49
Herc1E9PZP8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.01□□□□□ -0.49
Herc1E9PZP8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Herc1E9PZP8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Herc1E9PZP8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Herc1E9PZP8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Herc1E9PZP8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Herc1E9PZP8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Herc1E9PZP8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12□□□□□ -0.49
Herc1E9PZP8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Herc1E9PZP8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12□□□□□ -0.49
Herc1E9PZP8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12□□□□□ -0.49
Herc1E9PZP8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Herc1E9PZP8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12□□□□□ -0.49
Herc1E9PZP8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Herc1E9PZP8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Herc1E9PZP8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Herc1E9PZP8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12□□□□□ -0.49
Herc1E9PZP8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Herc1E9PZP8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Herc1E9PZP8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Herc1E9PZP8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Herc1E9PZP8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Herc1E9PZP8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Herc1E9PZP8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Herc1E9PZP8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Herc1E9PZP8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Herc1E9PZP8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Herc1E9PZP8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.98□□□□□ -0.49
Herc1E9PZP8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc1E9PZP8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc1E9PZP8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC11.98□□□□□ -0.49
Herc1E9PZP8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
Herc1E9PZP8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc1E9PZP8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc1E9PZP8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc1E9PZP8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Herc1E9PZP8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Herc1E9PZP8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC11.97□□□□□ -0.49
Herc1E9PZP8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Herc1E9PZP8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Herc1E9PZP8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Herc1E9PZP8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.97□□□□□ -0.49
Herc1E9PZP8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Herc1E9PZP8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Herc1E9PZP8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Herc1E9PZP8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Herc1E9PZP8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC11.97□□□□□ -0.49
Herc1E9PZP8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Herc1E9PZP8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Herc1E9PZP8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Herc1E9PZP8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.96□□□□□ -0.49
Herc1E9PZP8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Herc1E9PZP8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Herc1E9PZP8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Herc1E9PZP8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Herc1E9PZP8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Herc1E9PZP8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Herc1E9PZP8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Herc1E9PZP8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Herc1E9PZP8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Herc1E9PZP8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Herc1E9PZP8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC11.96□□□□□ -0.5
Herc1E9PZP8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Herc1E9PZP8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Herc1E9PZP8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.95□□□□□ -0.5
Herc1E9PZP8 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.95□□□□□ -0.5
Herc1E9PZP8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Herc1E9PZP8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Herc1E9PZP8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Herc1E9PZP8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Herc1E9PZP8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Herc1E9PZP8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Herc1E9PZP8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Herc1E9PZP8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Herc1E9PZP8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC11.95□□□□□ -0.5
Herc1E9PZP8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.94□□□□□ -0.5
Herc1E9PZP8 Gm9484-201ENSMUST00000195892 1159 ntBASIC11.94□□□□□ -0.5
Herc1E9PZP8 Gm43759-201ENSMUST00000196925 1261 ntBASIC11.94□□□□□ -0.5
Herc1E9PZP8 Gm5408-201ENSMUST00000197998 747 ntBASIC11.94□□□□□ -0.5
Herc1E9PZP8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Herc1E9PZP8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Herc1E9PZP8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Herc1E9PZP8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Herc1E9PZP8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Herc1E9PZP8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Herc1E9PZP8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Herc1E9PZP8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Herc1E9PZP8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms