Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
4933424G06RikA0A140LIP3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
4933424G06RikA0A140LIP3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
4933424G06RikA0A140LIP3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.02■□□□□ 0.96
4933424G06RikA0A140LIP3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
4933424G06RikA0A140LIP3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
4933424G06RikA0A140LIP3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.02■□□□□ 0.95
4933424G06RikA0A140LIP3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
4933424G06RikA0A140LIP3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
4933424G06RikA0A140LIP3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
4933424G06RikA0A140LIP3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
4933424G06RikA0A140LIP3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
4933424G06RikA0A140LIP3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
4933424G06RikA0A140LIP3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
4933424G06RikA0A140LIP3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
4933424G06RikA0A140LIP3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
4933424G06RikA0A140LIP3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
4933424G06RikA0A140LIP3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
4933424G06RikA0A140LIP3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
4933424G06RikA0A140LIP3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
4933424G06RikA0A140LIP3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
4933424G06RikA0A140LIP3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
4933424G06RikA0A140LIP3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
4933424G06RikA0A140LIP3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21■□□□□ 0.95
4933424G06RikA0A140LIP3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
4933424G06RikA0A140LIP3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
4933424G06RikA0A140LIP3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
4933424G06RikA0A140LIP3 Gm10657-201ENSMUST00000193528 1031 ntBASIC21■□□□□ 0.95
4933424G06RikA0A140LIP3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
4933424G06RikA0A140LIP3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21■□□□□ 0.95
4933424G06RikA0A140LIP3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
4933424G06RikA0A140LIP3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
4933424G06RikA0A140LIP3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
4933424G06RikA0A140LIP3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
4933424G06RikA0A140LIP3 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.99■□□□□ 0.95
4933424G06RikA0A140LIP3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.99■□□□□ 0.95
4933424G06RikA0A140LIP3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
4933424G06RikA0A140LIP3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
4933424G06RikA0A140LIP3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
4933424G06RikA0A140LIP3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
4933424G06RikA0A140LIP3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.98■□□□□ 0.95
4933424G06RikA0A140LIP3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
4933424G06RikA0A140LIP3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
4933424G06RikA0A140LIP3 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.98■□□□□ 0.95
4933424G06RikA0A140LIP3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
4933424G06RikA0A140LIP3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
4933424G06RikA0A140LIP3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
4933424G06RikA0A140LIP3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
4933424G06RikA0A140LIP3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
4933424G06RikA0A140LIP3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
4933424G06RikA0A140LIP3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
4933424G06RikA0A140LIP3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
4933424G06RikA0A140LIP3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
4933424G06RikA0A140LIP3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
4933424G06RikA0A140LIP3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
4933424G06RikA0A140LIP3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
4933424G06RikA0A140LIP3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
4933424G06RikA0A140LIP3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
4933424G06RikA0A140LIP3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
4933424G06RikA0A140LIP3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.96■□□□□ 0.95
4933424G06RikA0A140LIP3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
4933424G06RikA0A140LIP3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.96■□□□□ 0.95
4933424G06RikA0A140LIP3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
4933424G06RikA0A140LIP3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
4933424G06RikA0A140LIP3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.96■□□□□ 0.95
4933424G06RikA0A140LIP3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
4933424G06RikA0A140LIP3 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.96■□□□□ 0.95
4933424G06RikA0A140LIP3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
4933424G06RikA0A140LIP3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.95■□□□□ 0.94
4933424G06RikA0A140LIP3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
4933424G06RikA0A140LIP3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
4933424G06RikA0A140LIP3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
4933424G06RikA0A140LIP3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
4933424G06RikA0A140LIP3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
4933424G06RikA0A140LIP3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.94■□□□□ 0.94
4933424G06RikA0A140LIP3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.94■□□□□ 0.94
4933424G06RikA0A140LIP3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.94■□□□□ 0.94
4933424G06RikA0A140LIP3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.93■□□□□ 0.94
4933424G06RikA0A140LIP3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
4933424G06RikA0A140LIP3 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.93■□□□□ 0.94
4933424G06RikA0A140LIP3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
4933424G06RikA0A140LIP3 Serp2-204ENSMUST00000228055 705 ntBASIC20.93■□□□□ 0.94
4933424G06RikA0A140LIP3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
4933424G06RikA0A140LIP3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
4933424G06RikA0A140LIP3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
4933424G06RikA0A140LIP3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
4933424G06RikA0A140LIP3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
4933424G06RikA0A140LIP3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
4933424G06RikA0A140LIP3 Gm43137-201ENSMUST00000198052 594 ntBASIC20.92■□□□□ 0.94
4933424G06RikA0A140LIP3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
4933424G06RikA0A140LIP3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
4933424G06RikA0A140LIP3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
4933424G06RikA0A140LIP3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
4933424G06RikA0A140LIP3 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.92■□□□□ 0.94
4933424G06RikA0A140LIP3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
4933424G06RikA0A140LIP3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
4933424G06RikA0A140LIP3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
4933424G06RikA0A140LIP3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
4933424G06RikA0A140LIP3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.91■□□□□ 0.94
4933424G06RikA0A140LIP3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms